Gene Strop_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1944 
Symbol 
ID5058407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2216277 
End bp2216741 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID640474218 
Producthypothetical protein 
Protein accessionYP_001158784 
Protein GI145594487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.181945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.234627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTGCT CATGGCTGTT CCCATCCACG CTCGGCGTAG ACGTCGCCCT TGAGGTAGTG 
GTCAAGCGCC TCGGCCGCGT ACGGGAGGAG TTCCTACGCT TCCTGCGCAC CATCGACCGG
GCAACCCCGC CCGACCTGGA ACTGCATCTC GTGCTGGACA ACTACGCCAC CCACAAGACG
CCAGCCATCC AGCAGTGGCT ACTCAAGCAC CCCCGGTTCC ACCTGCACTT CACCCCGACC
TACTCGTCAT GGCTCAATCT CGTCGAGCGC TGGTTCGCCG AGCTGACCAA CCGCAAACTC
CGCCGATCGA CCCACCGCAA TGTCGCCGCA CTGGAAGCCG ACGTCACCGC CTGGATCGAG
GCGTGGAACG CCGACCCCAA ACCGTTCGTG TGGACCAAGA CGGCGGACGA CATCCTCGAA
ACGATCGCCG CATACTGTCA ACGAATTAAC GACTCAGCAC ACTAG
 
Protein sequence
MGCSWLFPST LGVDVALEVV VKRLGRVREE FLRFLRTIDR ATPPDLELHL VLDNYATHKT 
PAIQQWLLKH PRFHLHFTPT YSSWLNLVER WFAELTNRKL RRSTHRNVAA LEADVTAWIE
AWNADPKPFV WTKTADDILE TIAAYCQRIN DSAH