Gene Strop_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1943 
Symbol 
ID5058406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2215413 
End bp2216075 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID640474217 
Producthypothetical protein 
Protein accessionYP_001158783 
Protein GI145594486 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.16515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.237539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATG ACGAACTCGC TCCTCGACCT ACCATCAACT CGGCGGTGGT GTCAGTAGCG 
AGGTTCCTTG GTTCAACTCA CGCGGAGGGA CCGGGCGAGC GCACCGCGGT CTGGGTGCAG
GGCTGCGCCA TCCGGTGCCC CGGCTGCTTC AACCCGCACA TGTGGAGCTT CCGAGGCGGG
GAACAGGTAG CAACAGACGA CCTGGTGACC CGCATCCTCG ACTCGGGCAC CGCCGGGCTG
ACGCTGCTCG GCGGGGAACC CTTCGATCAA GCCGCCGCAT TGTCCAAGGT CACTCGCGCG
GTACGGAGCG CTGGCCGATC GGTCATGACC TTCACCGGAT ACACCGAGGC GCAGCTGCGG
CAGGCCATCG AGGCGGGCCG CGCCGATGTT GCCGCGCTGC TCGGCGAGAC GGACCTGCTC
GTTGCTGGAC CTTTCCTCAA CGACCGGATC GACCCCGTTC GGCCCTGGGT CGGCTCGACG
AACCAGGAGT TCGTCGTGCT GAGCGACCGC TTCCCGCATC TACTCGATCA TCTGCGACGC
ACACCCGACC GCGTCGAGAT AGACGTCGAC ACCTCCGGCC AGATCGCGAT CAACGGGTGG
GCGGAGCTGG AGTTGCTGGA CGAGCTGCTC GCGCCAGTGG CCCGCCCCCT ACGCAACCGG
TGA
 
Protein sequence
MSDDELAPRP TINSAVVSVA RFLGSTHAEG PGERTAVWVQ GCAIRCPGCF NPHMWSFRGG 
EQVATDDLVT RILDSGTAGL TLLGGEPFDQ AAALSKVTRA VRSAGRSVMT FTGYTEAQLR
QAIEAGRADV AALLGETDLL VAGPFLNDRI DPVRPWVGST NQEFVVLSDR FPHLLDHLRR
TPDRVEIDVD TSGQIAINGW AELELLDELL APVARPLRNR