Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1943 |
Symbol | |
ID | 5058406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2215413 |
End bp | 2216075 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474217 |
Product | hypothetical protein |
Protein accession | YP_001158783 |
Protein GI | 145594486 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.16515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.237539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATG ACGAACTCGC TCCTCGACCT ACCATCAACT CGGCGGTGGT GTCAGTAGCG AGGTTCCTTG GTTCAACTCA CGCGGAGGGA CCGGGCGAGC GCACCGCGGT CTGGGTGCAG GGCTGCGCCA TCCGGTGCCC CGGCTGCTTC AACCCGCACA TGTGGAGCTT CCGAGGCGGG GAACAGGTAG CAACAGACGA CCTGGTGACC CGCATCCTCG ACTCGGGCAC CGCCGGGCTG ACGCTGCTCG GCGGGGAACC CTTCGATCAA GCCGCCGCAT TGTCCAAGGT CACTCGCGCG GTACGGAGCG CTGGCCGATC GGTCATGACC TTCACCGGAT ACACCGAGGC GCAGCTGCGG CAGGCCATCG AGGCGGGCCG CGCCGATGTT GCCGCGCTGC TCGGCGAGAC GGACCTGCTC GTTGCTGGAC CTTTCCTCAA CGACCGGATC GACCCCGTTC GGCCCTGGGT CGGCTCGACG AACCAGGAGT TCGTCGTGCT GAGCGACCGC TTCCCGCATC TACTCGATCA TCTGCGACGC ACACCCGACC GCGTCGAGAT AGACGTCGAC ACCTCCGGCC AGATCGCGAT CAACGGGTGG GCGGAGCTGG AGTTGCTGGA CGAGCTGCTC GCGCCAGTGG CCCGCCCCCT ACGCAACCGG TGA
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Protein sequence | MSDDELAPRP TINSAVVSVA RFLGSTHAEG PGERTAVWVQ GCAIRCPGCF NPHMWSFRGG EQVATDDLVT RILDSGTAGL TLLGGEPFDQ AAALSKVTRA VRSAGRSVMT FTGYTEAQLR QAIEAGRADV AALLGETDLL VAGPFLNDRI DPVRPWVGST NQEFVVLSDR FPHLLDHLRR TPDRVEIDVD TSGQIAINGW AELELLDELL APVARPLRNR
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