Gene Strop_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1937 
Symbol 
ID5058400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2210567 
End bp2211064 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID640474211 
Producthypothetical protein 
Protein accessionYP_001158777 
Protein GI145594480 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.107266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0858288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG TCGCTGGCCG GTTTCGGCGG GTGGAGCCAC GCCGGCGGGC CCGGGCCTAT 
GTGTTGGGCC TGTTGTCGCC GCTGGCTGGC AAGAATGGCT GGACGCTGGC CGAGGCGGCC
GGGGAGAACA CCCCTGACGG TATGCAAAGG CTGCTCAACA GGTCGGCGTG GGACGCTGAG
GCGGTCCGCG ATGACCTGCG CGACTACGTC GCGGAGCATC TCGGCGACGC CGACGGCGTT
CTGATCATCG ATGAGACGGG GTTCCTGAAG AAGGGAACCA AGTCCGCCGG CGTCCAACGC
CAGTACTCCG GGACCGCCGG GCGGACCGAG AACTGCCAGC TCGGGGTGTT CCTGGCGTAT
GCGTCCGCGT ACGGGCGCAC CTTGATCGAC CGGGAACTGT ATCTGCCGCA GAGTTGGTGC
GCCGATGACG GCCGGCGGAC CGAAGCCGCG GTACCGGCGA AGGTGCGGTT CGCGACCAAG
CCGGCGCTGG GGTTGTAG
 
Protein sequence
MARVAGRFRR VEPRRRARAY VLGLLSPLAG KNGWTLAEAA GENTPDGMQR LLNRSAWDAE 
AVRDDLRDYV AEHLGDADGV LIIDETGFLK KGTKSAGVQR QYSGTAGRTE NCQLGVFLAY
ASAYGRTLID RELYLPQSWC ADDGRRTEAA VPAKVRFATK PALGL