Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1937 |
Symbol | |
ID | 5058400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2210567 |
End bp | 2211064 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474211 |
Product | hypothetical protein |
Protein accession | YP_001158777 |
Protein GI | 145594480 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.107266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0858288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGG TCGCTGGCCG GTTTCGGCGG GTGGAGCCAC GCCGGCGGGC CCGGGCCTAT GTGTTGGGCC TGTTGTCGCC GCTGGCTGGC AAGAATGGCT GGACGCTGGC CGAGGCGGCC GGGGAGAACA CCCCTGACGG TATGCAAAGG CTGCTCAACA GGTCGGCGTG GGACGCTGAG GCGGTCCGCG ATGACCTGCG CGACTACGTC GCGGAGCATC TCGGCGACGC CGACGGCGTT CTGATCATCG ATGAGACGGG GTTCCTGAAG AAGGGAACCA AGTCCGCCGG CGTCCAACGC CAGTACTCCG GGACCGCCGG GCGGACCGAG AACTGCCAGC TCGGGGTGTT CCTGGCGTAT GCGTCCGCGT ACGGGCGCAC CTTGATCGAC CGGGAACTGT ATCTGCCGCA GAGTTGGTGC GCCGATGACG GCCGGCGGAC CGAAGCCGCG GTACCGGCGA AGGTGCGGTT CGCGACCAAG CCGGCGCTGG GGTTGTAG
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Protein sequence | MARVAGRFRR VEPRRRARAY VLGLLSPLAG KNGWTLAEAA GENTPDGMQR LLNRSAWDAE AVRDDLRDYV AEHLGDADGV LIIDETGFLK KGTKSAGVQR QYSGTAGRTE NCQLGVFLAY ASAYGRTLID RELYLPQSWC ADDGRRTEAA VPAKVRFATK PALGL
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