Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1933 |
Symbol | |
ID | 5058396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2208058 |
End bp | 2208366 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640474207 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001158773 |
Protein GI | 145594476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00315482 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.132738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAAGC CTTACCCCCG AGAGTTCCGT GATGACGTCG TGCAGGTGGC CCGTGACCGC GAGCCGGGCG TGACGGTCGA GCAGATCGCG AAGGACTTCG GGGTTCACCC GATGACGTTG TTCAAGTGGC TGCGTCAGGC CGACATCGAC GCTGGTGCGA AGCCCGGTAC GCCCAGTGGC GAGTCAGCCG AGCTGCGCGA GGCCCGCAAG CGGATCCGGT TGTTGGAGCA GGAGAACGAG GTCCTGCGTC GGGCCGCTGC TTACTTGTCG CAGGCGCATC TGCCGGGAAA AGGCTCTACC CGCTCGTGA
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Protein sequence | MPKPYPREFR DDVVQVARDR EPGVTVEQIA KDFGVHPMTL FKWLRQADID AGAKPGTPSG ESAELREARK RIRLLEQENE VLRRAAAYLS QAHLPGKGST RS
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