Gene Strop_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1933 
Symbol 
ID5058396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2208058 
End bp2208366 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID640474207 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001158773 
Protein GI145594476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00315482 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.132738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAGC CTTACCCCCG AGAGTTCCGT GATGACGTCG TGCAGGTGGC CCGTGACCGC 
GAGCCGGGCG TGACGGTCGA GCAGATCGCG AAGGACTTCG GGGTTCACCC GATGACGTTG
TTCAAGTGGC TGCGTCAGGC CGACATCGAC GCTGGTGCGA AGCCCGGTAC GCCCAGTGGC
GAGTCAGCCG AGCTGCGCGA GGCCCGCAAG CGGATCCGGT TGTTGGAGCA GGAGAACGAG
GTCCTGCGTC GGGCCGCTGC TTACTTGTCG CAGGCGCATC TGCCGGGAAA AGGCTCTACC
CGCTCGTGA
 
Protein sequence
MPKPYPREFR DDVVQVARDR EPGVTVEQIA KDFGVHPMTL FKWLRQADID AGAKPGTPSG 
ESAELREARK RIRLLEQENE VLRRAAAYLS QAHLPGKGST RS