| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1932 |
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| Symbol | |
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| ID | 5058395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2207198 |
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| End bp | 2208061 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640474206 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001158772 |
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| Protein GI | 145594475 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00436726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0854041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC TGGCCGCCGA CGGGATCCCC GTCGCGGTGA CGTGCCGGGT ATTGAACATC
GCTCGTCAGC CCTACTACCG GTGGCTCGGC CGGCCCGTCG GTGACGCCGA ACTCGTCGCC
GCTCATCGCG CGAACGCCTT GGTCGATGCC CACCGCGATG ACCCGGAGTT CGGGTACCGG
TTCCTGGTCG ATGAGGCCCG CGCCGCCGGC CAGGCGATGG CGGAGCGCAC CGGGTGGAAG
ATCTGCTCGG ACAATGGCTG GTGGAGCGCC TTCGGTAAGC GCAAGAAGCG CGGCAAGGGT
GGCAAGGTCG GTTCACCGGT TCACGACGAC CTCGTGCAAC GGGACTTCAC CGCCGACGGC
CCGAACCGGT TGTGGCTGGC CGACATCACC GAACACCGCA CCGGCGAGGG CAAGCTCTAC
CTGTGCGCGA TCAAGGACGT GTGGTCGAGG CGGATCGTCG GCTACTCCAT CGACTCACGG
ATGAAGTCCC GGCTGGCCGT CAACGCGTTG CACAACGCTG TAGCCCGACG CGGCCGGCTG
GCCGGCTGCG TGCTGCACAC CGACCGTGGG TCGCAGTTTC GCAGCCGAAA ATTCGTCCAC
GCCCTGCACC AGCATCACAT GACCGGATCG ATGGGCAGAG TCGGCGCCGC CGGCGACAAC
GCCGCCATGG AATCGTTCTT CGGGTTGCTG CAGAACAACG TCCTCGACCG GCGGACCTGG
ACCACCCGCC AGCAGCTCAG GACCGCGATC GTGACCTGGA TCGAGCGGAC CTACCACCGC
CGCCGACGAC AACACTCTCT GTCCCGGTTG ACCCCTATCG AGTACGAGAC CATCATGACC
CCACCGGCCA GTCAGGCCGC GTGA
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| Protein sequence | MSELAADGIP VAVTCRVLNI ARQPYYRWLG RPVGDAELVA AHRANALVDA HRDDPEFGYR
FLVDEARAAG QAMAERTGWK ICSDNGWWSA FGKRKKRGKG GKVGSPVHDD LVQRDFTADG
PNRLWLADIT EHRTGEGKLY LCAIKDVWSR RIVGYSIDSR MKSRLAVNAL HNAVARRGRL
AGCVLHTDRG SQFRSRKFVH ALHQHHMTGS MGRVGAAGDN AAMESFFGLL QNNVLDRRTW
TTRQQLRTAI VTWIERTYHR RRRQHSLSRL TPIEYETIMT PPASQAA
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