Gene Strop_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1929 
Symbol 
ID5058391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp2204076 
End bp2204759 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content72% 
IMG OID640474202 
Productcytidylate kinase 
Protein accessionYP_001158769 
Protein GI145594472 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.339445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.343027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAAA ACGTACGGAC CGGGGGCTGC GTGGTCGCTG TGGACGGGCC GTCCGGTTCG 
GGTAAGTCCA CCGTCTCCCG GCGACTCGCG ATCGCCCTGG GCGCGCGCTA CCTCGACACC 
GGCGCGATGT ACCGGGCGGT CACCTGGGCG GTGCTGCGCT CCGGAGTTGA TCTGGCCGAC 
CCGTCGGCCG TGGCCAAGGT CGCCGGAGAA ACCGAGCTCG GCATCGGCAC CGATCCCGAG 
GGATACGGCG TGACCGCCGA CGGCGTACCC GTCGAGGTGG AGATCCGCGG ATCCGAGGTG 
ACCGGGGCGG TCTCGGCCGT GGCCGCCGTA CCGGCGGTCC GTTCGTTGCT CGTCACCCGG 
CAGCGGGACC TGGCCGCTGC CGCCGGCCGG ATCGTGATCG AGGGGCGCGA CATCGGTGCG 
GTAGTGGCAC CCAACGCCGA CCTGAAGGTC TTCCTGACCG CGTCCGCGGC GGCCCGGGCA 
GCCCGTCGCA GCGCCGAGAA CGCCACCGAC GTGGGGCACA CCGCCACCGA CCTGGCCCGT 
CGGGACCGGC TGGACTCAAC TCGCAAGGCC GACCCGATGG TGCCGGCCCT GGACGCCGTG 
GTGCTGGACA CCACTGAACT CGGCATCGAC GAGGTCGTCG TGCGACTGCG GGAGATGCTG 
GCCGAGCGGG GTGTGGGTCG ATGA
 
Protein sequence
MEENVRTGGC VVAVDGPSGS GKSTVSRRLA IALGARYLDT GAMYRAVTWA VLRSGVDLAD 
PSAVAKVAGE TELGIGTDPE GYGVTADGVP VEVEIRGSEV TGAVSAVAAV PAVRSLLVTR 
QRDLAAAAGR IVIEGRDIGA VVAPNADLKV FLTASAAARA ARRSAENATD VGHTATDLAR 
RDRLDSTRKA DPMVPALDAV VLDTTELGID EVVVRLREML AERGVGR