Gene Strop_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1927 
Symbol 
ID5058389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2202299 
End bp2203147 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID640474200 
Productsegregation and condensation protein B 
Protein accessionYP_001158767 
Protein GI145594470 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.121193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.224163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACG AGAAACACGG GGACTCCCTG GCCGACCAGG CCGCCGCGTG GATCCCGCCA 
TGGGAACGCC ACCGCGAGAC ACCGGCCGAA CCGGTCGAGG CGCAAGCCGC TGCCGTGCCG
CGCGGGGGAG AACCCCACCC CGAACCGCCC GGCGCGGCCG AGAGTCACCA CCCCGTCGCC
GTGCCCGGAG AATCGGCTGG TGCTGGTGTC GAAGCGGGTG CGGGCACGGG AGTAGGCAGG
GTATCGGTAC CCGACCGGGG ACGGCCCCGC CAACGAGTGC CGGCCCCACC CGTGTCGGTG
CTCGACGACG CCGAGCTACG CGCCGCCCTG GAAGCAATCC TCCTGGTCGT GGACGAGCCG
GTTGCCGAAA CGACCCTCGC CGACGTGCTG GAGCAGCCGC TTGACCGGGT CCAGGCGATG
CTGCACGCCA TCTCCACTGG CTACACCACC CGTGGGCACG GCTTCGAGCT GCGTCGAGCG
GCCGGCGGCT GGCGCCTGTA CACCCGGCCA GAGTACGCCG GGTACGTGGA GCGGTTCGTC
CTCGACGGCC AGACCGTACG GCTGACCCAG GCCGCGCTGG AGACCCTGGC CGTGGTCTCC
TACAAACAGC CGGTTACCCG ATCCCGGATC TCCGCCATCC GCGGTGTGAA CTGCGACGGG
GTGGTCCGTA CCCTGGTCTC CCGCGGGCTG GTGGAGGAGT GCGGCACCGA ACCGGAAACC
GGTGCCCACC TCTACCGGAC CACCACCCTG TTCCTGGAGA AGCTCGGCTT GGACAGCATC
ACCGACCTGC CGCCGCTCGC TCCGTTCCTC CCCGACGATG TGGAAGACCT CGCCGATGCC
TCGCGATAA
 
Protein sequence
MGDEKHGDSL ADQAAAWIPP WERHRETPAE PVEAQAAAVP RGGEPHPEPP GAAESHHPVA 
VPGESAGAGV EAGAGTGVGR VSVPDRGRPR QRVPAPPVSV LDDAELRAAL EAILLVVDEP
VAETTLADVL EQPLDRVQAM LHAISTGYTT RGHGFELRRA AGGWRLYTRP EYAGYVERFV
LDGQTVRLTQ AALETLAVVS YKQPVTRSRI SAIRGVNCDG VVRTLVSRGL VEECGTEPET
GAHLYRTTTL FLEKLGLDSI TDLPPLAPFL PDDVEDLADA SR