Gene Strop_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1922 
Symbol 
ID5058384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2197452 
End bp2197865 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID640474195 
ProductTM2 domain-containing protein 
Protein accessionYP_001158762 
Protein GI145594465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.134509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACTC CCGCTAACGA TGTGTCAAGC GGAGCGGACC CGGTCAACGC CCGGTACTCG 
GCGGCTCTCT CCACTGTTGG GGCGCCTCCC GCCTCTCGTC AGACGTACCG ATCCCCCGTG
CGGACAGCTA GCTGTGGATC ACTACTGTGT CGCCTCATGA CTACTCCTCA CTACCAGCCC
GGCTACCCGG CGGGCGTGTC CGACAGAAGT AAGGTCGTCG CGGGCGTCCT GCAGATCCTG
CTCGGCGGCT TCGGCATCGG CCGGTTCTAC ATGGGCGACA CCAGGACCGG TGTAATCCAG
CTCATCGTCA GCCTGATTAC GTGCGGCTTC GGCGCCCTCT GGGGCTTGAT TGACGGCATC
CTGATCCTGG TCAACGGCGG CGTCGACGGT CAAGGCCGAC CGCTGCGCGG CTGA
 
Protein sequence
MNTPANDVSS GADPVNARYS AALSTVGAPP ASRQTYRSPV RTASCGSLLC RLMTTPHYQP 
GYPAGVSDRS KVVAGVLQIL LGGFGIGRFY MGDTRTGVIQ LIVSLITCGF GALWGLIDGI
LILVNGGVDG QGRPLRG