Gene Strop_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1920 
SymbolpyrG 
ID5058382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2195051 
End bp2196796 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content69% 
IMG OID640474193 
ProductCTP synthetase 
Protein accessionYP_001158760 
Protein GI145594463 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.270417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCCTT CAGTACGGAC GACCAGGCAT ATTTTCGTCA CCGGGGGCGT GGCCTCCTCA 
TTGGGTAAAG GCCTGACCGC CTCCAGCCTC GGCAGCTTGC TCACCGCGCG TGGCATGCGT
GTGGTGATGC AGAAGCTCGA CCCCTACCTC AACGTGGACC CGGGGACGAT GAACCCGTTC
CAGCACGGTG AGGTCTTCAT TACCGAGGAC GGCGCCGAGA CGGATCTCGA TGTCGGCCAC
TACGAGCGGT TCCTCGACCG GGACCTGTCC GGCAAGGCCA ACGTCACCAC CGGGCAGATC
TACTCAGACG TGATCGCCAA GGAACGGCGC GGCGAGTACC TGGGCGACAC CGTCCAGGTC
ATCCCGCACA TCACCAACGA AATCAAGTCG CGGGTGCTCG GCATGGCCGA ACCGGACGGC
GAGGGCCAGG TGCCGGACGT CGTCATCACC GAGGTCGGCG GGACCGTCGG CGACATCGAG
TCGCTGCCGT TCCTGGAGGC GATCCGGCAG ATCCGCCACG ACCTGGGCCG GGACAACTGC
TTCTATCTGC ACGTCTCGCT GGTGCCGTAC CTGGCGCCGT CGGGCGAGCT GAAGACCAAG
CCCACCCAAC ACTCGGTAGC GCAGCTGCGC AGCATCGGTA TCCAGCCGGA CGCACTGGTA
CTGCGCTGCG ACCGGGAGAT TCCGGACAAG GTCAAGCAGA AGCTCGCCCT CTACTGCGAC
GTTGACCTGG AGGCGGTCAC CGCCGCCGCG GACGCACCCA GCATCTACGA CATCCCGAAG
GTGCTGCACC GGGAGGGCCT TGACGCCTAC GTGGTGCGTC GGCTCGGTCT CTCCTTCCGG
GACGTGGCCT GGGCGCGCTG GGACGACCTG CTGGAGCGGG TGCACCAGCC CCGGCACACG
ATCACCGTTG CCCTCGTGGG CAAGTATGTT GACCTGCCCG ACGCGTACCT GTCGGTGAGT
GAGGCGATCC GCGCCGCGGG CTTCGGGCAC CGGGCCCGGG TACGGCTGAA GTGGGTACCC
AGCGACGAGT GTGTCACCCC GGCCGGTGCC GCGGCCGCCC TGGCCGGGGT CGACGGTGTC
GTCATCCCGG GCGGGTTCGG CGTCCGCGGC ATCGAGGGCA AGGTCGGCGC CGCCCGGCAC
GCCCGGGAGC ACGGTGTTCC GCTGCTCGGC CTCTGCCTCG GCCTCCAGTG CATGACCATT
GAGGTGGCCC GTCACCTCGC TGGGCTGGAC GGTGCGAACT CGCTGGAGTT CGACGGGGAG
GCCACACATC CGGTCATCGC CACCATGGCC GACCAGGAGG ACATCGTCGC TGGCCGGGGT
GACCTCGGCG GCACCATGCG GCTCGGGGCA TGGCCGGCGG TGCTCACCGA GGGGTCGATC
GTCGCCAAGG CGTACGGCAG CACCGAGGTG AGCGAGCGGC ATCGGCACCG GTACGAGGTG
AACAACGCCT ACCGTGACGT GCTCACCAAG GCGGGCCTGC ACATCTCGGG GACCTCGCCG
GACGGCCGGC TGGTCGAGTT CGTCGAACTG GACCGCGACC TGCATCCGTT CTTCGTGGCC
ACCCAGGCGC ACCCGGAGCT GAAGAGCCGT CCGACCCGCC CACACCCGCT GTTCGCGTCA
TTCGTGGCGG CGGCCCTCGC GTACTCGCAG GCTGATCAGC TCCCGGTCGA CCTGGACGGT
GCGGCGGCGA CGAAGGCTGC CAGCAACGGC GGGACCAGCA CGGCGCCGGC GGCTTCGACA
TCGTGA
 
Protein sequence
MAPSVRTTRH IFVTGGVASS LGKGLTASSL GSLLTARGMR VVMQKLDPYL NVDPGTMNPF 
QHGEVFITED GAETDLDVGH YERFLDRDLS GKANVTTGQI YSDVIAKERR GEYLGDTVQV
IPHITNEIKS RVLGMAEPDG EGQVPDVVIT EVGGTVGDIE SLPFLEAIRQ IRHDLGRDNC
FYLHVSLVPY LAPSGELKTK PTQHSVAQLR SIGIQPDALV LRCDREIPDK VKQKLALYCD
VDLEAVTAAA DAPSIYDIPK VLHREGLDAY VVRRLGLSFR DVAWARWDDL LERVHQPRHT
ITVALVGKYV DLPDAYLSVS EAIRAAGFGH RARVRLKWVP SDECVTPAGA AAALAGVDGV
VIPGGFGVRG IEGKVGAARH AREHGVPLLG LCLGLQCMTI EVARHLAGLD GANSLEFDGE
ATHPVIATMA DQEDIVAGRG DLGGTMRLGA WPAVLTEGSI VAKAYGSTEV SERHRHRYEV
NNAYRDVLTK AGLHISGTSP DGRLVEFVEL DRDLHPFFVA TQAHPELKSR PTRPHPLFAS
FVAAALAYSQ ADQLPVDLDG AAATKAASNG GTSTAPAAST S