Gene Strop_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1905 
Symbol 
ID5058364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2170884 
End bp2172170 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content68% 
IMG OID640474175 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001158745 
Protein GI145594448 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.13251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.168807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA CCAGTCCCCC GCCGCAAGGG CGGGACACAC TCTTCGACGA TCTGCGCTGG 
CGTGGCCTGA TCCAGGACTC CACCGGCCTC GACGAGCTGC GCGCGTTGCT CGACGGCCCG
GGGGCGGCCT TCTATGTGGG CTTCGACCCG ACCGCGTCGA GCCTGCACGT CGGTAGCCTC
ATGCAGGTCG TCACCGCCCG GCGGCTCCAA CTCGCCGGTC ACCGGCCGCT GCTGCTGGTC
GGCGGGGCGA CCGGGCAGAT CGGTGACCCG AAGGAGAGCG CCGAGCGGGT TCTCAACTCG
CCCGAGGTGG TGGCCGGCTG GGTGGCCCGG ATCCGGGATC AGCTGGCCCC CTTCGTGTCG
TACCAGGGGG CGAACGCGGC GCAGCTGGTC AATAACCTGG ACTGGACCGG CGAGATGTCG
GTGGTGGAGT TCCTGCGGGA TGTCGGCAAG CACTTCCCGG TCAACCGGAT GCTGGCACGC
GAGGTGGTGC GGGCCCGACT GGAGAGCGGG ATCAGCTTCA CCGAGTTCAG CTACCAGCTG
CTCCAGGCCA ACGACTTCTT CGAACTACAC CGCCGCCACG GGTGTCAGCT TCAGTTCGGT
GGCTCCGACC AGTGGGGCAA CATCACTGCT GGCGTCGACT ACATCCGTCG TCGGGGCGCG
GGGCCGGTGG AGGCGTTCAC CACGCCGTTG GTCACCAAGT CGGACGGTAC GAAGTTCGGC
AAGACCGAGG GCGGAGCGGT CTGGCTCGAC CCGGAGCTGA CCAGTCCGTA CGCGTTCTAC
CAGTTCTGGG TCAACGCGGA GGATCGCGAC GTCGCCCGCT ACCTGCGCTA CTTCAGCTTC
CGTCCCCGGG CCGAGCTGGA GGCGTTGGAG AAGGAGGCAG CGGAGCGGCC TGCCGCACGC
GTCGCCCAGC GGGCGCTTGC CGAGGAGCTG ACCACCCTGG TGCACGGCGA GCGGGAGATG
GCTCAGGTGG TCGCCGCGAG CCAGGCGTTG TTCGGCCGAG GGTCGCTGGC GGATCTCTCG
CCGGCGACGC TGCGCGCCGC CCTGACCGAG GCGGGCCTGG TCCACCTCGA CGAGTTGCCC
GACGTGGTCG GGCTACTCAA GGAGTCTGGT CTGGTGCCGA GCAACAAGGA AGCCCGTCGG
GTGATCGCTG AGGGGGGTGC CTACCTGAAC AACAACCGGG TGTCCTCGAC GGAGGCGACT
GTCGCTCCGG CGGACCTGTT GCACGATCGC TACCTGGTCC TGCGTCGGGG GAAGCGATCC
TTCGCCGGTG TTGAACTGCG AAAATAG
 
Protein sequence
MTDTSPPPQG RDTLFDDLRW RGLIQDSTGL DELRALLDGP GAAFYVGFDP TASSLHVGSL 
MQVVTARRLQ LAGHRPLLLV GGATGQIGDP KESAERVLNS PEVVAGWVAR IRDQLAPFVS
YQGANAAQLV NNLDWTGEMS VVEFLRDVGK HFPVNRMLAR EVVRARLESG ISFTEFSYQL
LQANDFFELH RRHGCQLQFG GSDQWGNITA GVDYIRRRGA GPVEAFTTPL VTKSDGTKFG
KTEGGAVWLD PELTSPYAFY QFWVNAEDRD VARYLRYFSF RPRAELEALE KEAAERPAAR
VAQRALAEEL TTLVHGEREM AQVVAASQAL FGRGSLADLS PATLRAALTE AGLVHLDELP
DVVGLLKESG LVPSNKEARR VIAEGGAYLN NNRVSSTEAT VAPADLLHDR YLVLRRGKRS
FAGVELRK