Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1905 |
Symbol | |
ID | 5058364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2170884 |
End bp | 2172170 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474175 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_001158745 |
Protein GI | 145594448 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.13251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.168807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACA CCAGTCCCCC GCCGCAAGGG CGGGACACAC TCTTCGACGA TCTGCGCTGG CGTGGCCTGA TCCAGGACTC CACCGGCCTC GACGAGCTGC GCGCGTTGCT CGACGGCCCG GGGGCGGCCT TCTATGTGGG CTTCGACCCG ACCGCGTCGA GCCTGCACGT CGGTAGCCTC ATGCAGGTCG TCACCGCCCG GCGGCTCCAA CTCGCCGGTC ACCGGCCGCT GCTGCTGGTC GGCGGGGCGA CCGGGCAGAT CGGTGACCCG AAGGAGAGCG CCGAGCGGGT TCTCAACTCG CCCGAGGTGG TGGCCGGCTG GGTGGCCCGG ATCCGGGATC AGCTGGCCCC CTTCGTGTCG TACCAGGGGG CGAACGCGGC GCAGCTGGTC AATAACCTGG ACTGGACCGG CGAGATGTCG GTGGTGGAGT TCCTGCGGGA TGTCGGCAAG CACTTCCCGG TCAACCGGAT GCTGGCACGC GAGGTGGTGC GGGCCCGACT GGAGAGCGGG ATCAGCTTCA CCGAGTTCAG CTACCAGCTG CTCCAGGCCA ACGACTTCTT CGAACTACAC CGCCGCCACG GGTGTCAGCT TCAGTTCGGT GGCTCCGACC AGTGGGGCAA CATCACTGCT GGCGTCGACT ACATCCGTCG TCGGGGCGCG GGGCCGGTGG AGGCGTTCAC CACGCCGTTG GTCACCAAGT CGGACGGTAC GAAGTTCGGC AAGACCGAGG GCGGAGCGGT CTGGCTCGAC CCGGAGCTGA CCAGTCCGTA CGCGTTCTAC CAGTTCTGGG TCAACGCGGA GGATCGCGAC GTCGCCCGCT ACCTGCGCTA CTTCAGCTTC CGTCCCCGGG CCGAGCTGGA GGCGTTGGAG AAGGAGGCAG CGGAGCGGCC TGCCGCACGC GTCGCCCAGC GGGCGCTTGC CGAGGAGCTG ACCACCCTGG TGCACGGCGA GCGGGAGATG GCTCAGGTGG TCGCCGCGAG CCAGGCGTTG TTCGGCCGAG GGTCGCTGGC GGATCTCTCG CCGGCGACGC TGCGCGCCGC CCTGACCGAG GCGGGCCTGG TCCACCTCGA CGAGTTGCCC GACGTGGTCG GGCTACTCAA GGAGTCTGGT CTGGTGCCGA GCAACAAGGA AGCCCGTCGG GTGATCGCTG AGGGGGGTGC CTACCTGAAC AACAACCGGG TGTCCTCGAC GGAGGCGACT GTCGCTCCGG CGGACCTGTT GCACGATCGC TACCTGGTCC TGCGTCGGGG GAAGCGATCC TTCGCCGGTG TTGAACTGCG AAAATAG
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Protein sequence | MTDTSPPPQG RDTLFDDLRW RGLIQDSTGL DELRALLDGP GAAFYVGFDP TASSLHVGSL MQVVTARRLQ LAGHRPLLLV GGATGQIGDP KESAERVLNS PEVVAGWVAR IRDQLAPFVS YQGANAAQLV NNLDWTGEMS VVEFLRDVGK HFPVNRMLAR EVVRARLESG ISFTEFSYQL LQANDFFELH RRHGCQLQFG GSDQWGNITA GVDYIRRRGA GPVEAFTTPL VTKSDGTKFG KTEGGAVWLD PELTSPYAFY QFWVNAEDRD VARYLRYFSF RPRAELEALE KEAAERPAAR VAQRALAEEL TTLVHGEREM AQVVAASQAL FGRGSLADLS PATLRAALTE AGLVHLDELP DVVGLLKESG LVPSNKEARR VIAEGGAYLN NNRVSSTEAT VAPADLLHDR YLVLRRGKRS FAGVELRK
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