| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1904 |
|---|
| Symbol | |
|---|
| ID | 5058363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2170399 |
|---|
| End bp | 2170791 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640474174 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001158744 |
|---|
| Protein GI | 145594447 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.148319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGC CAGATCTGAA CGGCGGCTTC GTGGCGCTGC TGGGGCTGAG CTACGACGAG
GTCAGCGCCG ACCGGGTGGT CCTCCACTGG CAGGTCCGCC CCGAGCTACA CCAGCCGTAC
GGCATCCAGC ACGGCGGCGT CTACTGCTCG GTGGTCGAGA CCGCGGCGAG CATCGGCGGG
GCCACCTGGC TGGGCGACCG GGGGCAGGTC GTCGGCGTGT CGAACCAGAC CGATTTCCTG
CGCGCGGTCC GGTCGGGCGA GCTGACCGCC GTTGGCACCC CGATCCACCG CGGCCGCAGT
CAACAGCTGT GGCAGGTGGA GATCACCGAC GACGGTGACC GCCTGGTGGC GCGCGGACAG
GTCCGGCTAC AGAATCTGGC GACGGCGACC TGA
|
|---|
| Protein sequence | MDEPDLNGGF VALLGLSYDE VSADRVVLHW QVRPELHQPY GIQHGGVYCS VVETAASIGG
ATWLGDRGQV VGVSNQTDFL RAVRSGELTA VGTPIHRGRS QQLWQVEITD DGDRLVARGQ
VRLQNLATAT
|
|---|
| |