Gene Strop_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1893 
Symbol 
ID5058352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2161330 
End bp2161848 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content72% 
IMG OID640474163 
Productarginine repressor 
Protein accessionYP_001158733 
Protein GI145594436 
COG category[K] Transcription 
COG ID[COG1438] Arginine repressor 
TIGRFAM ID[TIGR01529] arginine repressor 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.547671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.237539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CGCTGACCCG CGCCGCCCGG CACGCCCGCA TCGTCGAGCT GATCCGGGAC 
AAGGCGATCC ACTCGCAGAC CGAGCTGGGC GACCTGTTGG CCGGTGACGG TATCCAGGCC
ACCCAGGCGA CCCTCTCCCG GGATCTCAAG GAACTCGGCG CGGTGACCGT ACGCGGCGGT
GACGGACGCG GCGTCTATCT GATCCCAGAG GACGGCCAGC GTCCGTTGCG GGAGGCCGAG
ACCGCCCCGG CGCGTCTCGT GCGCCTGCTG CGCGAGCTGC TCAACGGGGT TGACGCCAGC
GGCAACATCG CTGTGCTCCG TACCCCGCCC GGCGCGGCCC AGTTCCTGGC CAGCGCGTTG
GACCGCGCAG GCCTGCCCGA GGTCGTCGGC ACGATCGCCG GCGACGACAC CATCCTCGTC
GTGGCCCGCG AGGCCGACGG CGGAGCCGCG CTCGGCGACC AACTCGCCGG CTGGGCCCGC
CGCGAAGACA ACGTTGAAAG GAGCACACAC CATGACTGA
 
Protein sequence
MTAPLTRAAR HARIVELIRD KAIHSQTELG DLLAGDGIQA TQATLSRDLK ELGAVTVRGG 
DGRGVYLIPE DGQRPLREAE TAPARLVRLL RELLNGVDAS GNIAVLRTPP GAAQFLASAL
DRAGLPEVVG TIAGDDTILV VAREADGGAA LGDQLAGWAR REDNVERSTH HD