Gene Strop_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1888 
SymbolargC 
ID5058347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2155966 
End bp2156967 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID640474158 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_001158728 
Protein GI145594431 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.271615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.242396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATCC GAGTTGCGGT CGCTGGGGCG AGCGGTTACG CCGGGGGAGA ACTGCTGCGC 
CTGATCACCG GGCACCCGGA GTTCGACCTG GTCGCCGCCA CCGCGCACAG CCAGGCCGGA
CACCGGTTGG ACACCGTGCA TCCGCAGCTG ACCGGGCTGG AATTGGTTCT GGCCGAGACC
GACCCGGCTG CCCTGGCCGA TGCCGACCTG GTTTTCCTGG CGCTGCCGCA CGGTGAGTCG
GCAACGCTGG CCGCGCAGTT GCCGCCAAAG GTGCGCGTGG TTGACCTCGG TGCCGATCAC
CGGTTGGCCG ACCCGTACGC GTGGGCCAAC TACTACGGCG GTACCCACGC CGGGCAGTGG
ACCTACGGTC TGCCCGAGCT GCCGGGCCAG CGCGAGCGGA TCGCCGCCAC GACCCGGGTG
GCCAACCCCG GCTGCTACGC CAGCGCCATC GTCCTGGCGC TCGCCCCGCT GATCGCCGCC
GGTGCGGCTC AGCCGGCCGA CGTGGTGGTG GTGGCCGCCT CCGGTGCCTC GGGCGCCGGT
CGCGCCGCCA AGGCGCACCT GATCGCCGGT GAGGTCATGG GTGACCTGTC GCCGTACCGG
GTCGGTGCGC ACCAGCACGT TCCGGAGATC AAGCAGGCGA CCGGGGCGAC CAGCCTGTCG
TTCACCCCGG TGCTGGCGCC GATGCCACGG GGGATCCTCG CGACCGTCAC CGCCGTGCCC
GTACGCGACG TCGACCCGCA GGCGGTGCTC GCCGAGGCGT ACGCGGACGC GCCCTTCGTG
CACGTGCTGC CCGAGGGGCG GTGGCCACAC ACCGCCGCGA CCCTCGGCTC CAACTCCTGC
CACCTGCAGG CGACCGTTGA CGTGGACGCC GGGCGGTTGA TCGTGGTCAG CGGCCTGGAC
AACCTCGGTC GGGGCGCGGC CGGGCAGGCC GTGCAGAACG CCAACATCAT GCTCGGTCTG
CCGGAGACCA CCGGTCTGTC TGTCTGGGGA GTTAGCCCAT GA
 
Protein sequence
MGIRVAVAGA SGYAGGELLR LITGHPEFDL VAATAHSQAG HRLDTVHPQL TGLELVLAET 
DPAALADADL VFLALPHGES ATLAAQLPPK VRVVDLGADH RLADPYAWAN YYGGTHAGQW
TYGLPELPGQ RERIAATTRV ANPGCYASAI VLALAPLIAA GAAQPADVVV VAASGASGAG
RAAKAHLIAG EVMGDLSPYR VGAHQHVPEI KQATGATSLS FTPVLAPMPR GILATVTAVP
VRDVDPQAVL AEAYADAPFV HVLPEGRWPH TAATLGSNSC HLQATVDVDA GRLIVVSGLD
NLGRGAAGQA VQNANIMLGL PETTGLSVWG VSP