| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1887 |
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| Symbol | pheT |
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| ID | 5058346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2153196 |
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| End bp | 2155781 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640474157 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001158727 |
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| Protein GI | 145594430 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.447501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.335084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTT CTGTCAGTTG GCTGCGTGAG TACGTTGACC TGCCGGCGCA TCTGACCCCG
GCCGACCTCG AGCAGTCCCT GGTCGGTCTT GGTCTCGAGG TGGAGTCCAT CGTGGACCTG
GCCGGTACGG TCACCGGGCC GCTGGTCGTC GGCGAGGTGC GGGAGATTGA GGAGCTGACC
GGCTTCAAGA AGCCGATTCG CTTCTGTCGG GTGGACGTGG GTGACGCCAA CGGCACCGGC
GAGTTGCAGG AGATCGTCTG CGGGGCGCGC AACTTCGCGG TCGGTGACCG GGTGGTGGTG
ATCCTCCCCG GCGGGGTGCT GCCCGGTAAC TTCGCGATCG GGGCGCGCCG GACGTACGGG
CGTAACTCCA GGGGCATGAT CTGCTCGGCG AAGGAACTGG GCCTGGGCGA CGACCATGCC
GGCATCATTG TGCTGCCGGG CTCCAGCCCC GCCAAGCCGG GCGACGACGC CCGCCCCGTG
GTTGGCCTCG ACGACGTGGT GGTCGAGGTG GAGCTGACCC CGGACCGGGG TTACCAGATG
TCGGTGCGGG GGATCGCCCG GGAGCTGTCG CACGCGTTCG GGGTGCCGTT TCGGGATCCG
GGGCTCGCGT CCGCCCCGGC CGGGACCGAA GCGCCCGCGT ACCCGGTGGA GGTGCGGGAT
CCCGTCGGCT GTGACCGGTT CGCGGCGCGG ATGGTACGTG GCGTCAACCC GGCCGCGCCG
TCGCCGGCCT GGATGGTCCA ACGGCTCACC ACCGCCGGCA TTCGCAGCCT CTCGCTGCCG
GTCGATATCA CCAACTACGT GATGCTCGAG CTGGGCCAGC CGATGCACGC CTTCGACGCG
GACCGGATCA CCGGCTCGCT GGTGGTCCGC CGGGCCGTGG CGGGGGAGCA GTTGACCACC
CTGGACGGGG TGGTGCGCAC GCTCGTCGCC GAGGACATGG TGATCTCTGA TGCGGGGCTG
CCGAATCCGA ACCCGGCTGC GGGCGCGGAC GCCGGTGCCC CGATTTCGCT CGCTGCCGTC
ATGGGTGGGG AGAGCAGCGA GGTGGTCGCG GAGACCAGCA ACGTGTTGTT CGAGGCGGCC
CACTGGGATC CGGTGATGGT GGGGCGCACC GCCCGCCGGC ACCGGCTGTT CAGCGCGGCA
GCCAAGCGGT GGGAGCGGGG CGTCGACCCA GCCCTGCCGT TGGTTGCCAT CGACCGGGCG
GTGCGGCTGC TGGTGGAGCA TGGCGGCGGC GCGACCGGTG CGGAGATCCT CGATATCGAT
CATCGAACGT CGCCGGTACC GGTGGTCATG CCGGCGGACC TGCCGTCTCG ACGGGTCGGG
GTGGCCTACC CGGCGGACCG GGTGGCTGCC CTGCTCACCG AGATCGGCTG CACGGTTGCC
GCCGGCCCGG ATCAGCTCAC CGCGGATCCG GGTGAGGTGG GTGTCGCCGC TGGTGGCGCG
GTCTCGTTCG TGGTTACCCC GCCGACCTGG CGACCCGACC TGACCGACCC GGCCGACCTG
GTCGAGGAGG TGGTCCGTCT CGACGGCTAC GACCGGGTGC CGGCGGTGCT GCCGGTGGCC
CCCGCCGGCC GGGGCTTGAC CTGGCAGCAG CGGCGCCGGC GGGCGGTGGC CAGGATGCTC
GCCGACCGGG GGTACGTGGA GGTGCTCTGC TCGCCGTTCG TGGCGGTCGA GCTGGCCGAC
CAGCTGGGCC TGCCGGCCGG CGATGCGCGG CGGCGGGCGG TGCGGCTGGC CAACCCGCTG
TCGGAGGAGG AGCCGGCGCT GCGGACGACG CTGCTTGGTC CGCTGCTCGG TGTGCTCCGG
CGGAACCTGG GCCGGGGCCA GCGGGACCTC GCGCTGTACG AGATCGGGAC GGTCTTCCAC
CCGCGGACCG AGGCCGGCAC TCCGCCGCGG ATGGGGGTGG AGCACCGGCC GTCGGACGCG
GAGCTCGCCG CCGCCGATGC GGTGCTGCCG GAGCAGCCCC AGCACGTCGC CGTGGTGCTC
GCCGGTGAGG TCGAGCCGGG TGGCTGGTGG GGCGAGGGGC GCCCGGCCGG CTGGGCGGAC
GCGGTCGAGG CGGCCCGGAC GGTGCTCGCC GCCGCCGGTA TTCCCGAGGA CCGGGTGACC
GTGCGGGCCG TGGAGCACGC CCCCTGGCAC CCCGGGCGCT GTGCGCAGCT GGTGGTGGAC
GGCGTGACTG TCGGGTACGC GGGGGAGCTG CATCCGGCGG TGATCGCCGG GTTGGAGTTG
CCCCGCCGTA CCGCGGCGAT GGAGCTGGAC CTGGACGCGG TCCCGGCGGC CCCGGTGCGG
CAGGCCCCGG TGATCTCGTC CTTCCCGCCC GCCCTGATCG ATGTGGCGCT GGTGGTCGAT
GTCGACGTGC CGGTCGCCCA GGTGCAGGGG GCGCTGGTGG AGGGGGCCGG CGAGCTGTTG
GAGTCGGTCC GGCTCTTCGA CGTGTACGCC GGTGAGCAGC TCGGCGCGGG TCGTCGGTCG
TTGGCGTACA AGCTGACCTT CCGTGCGCCG GATCGGACGC TGACGGTGGA GGAGGCGGTC
GCGGCGCGGG ACGCGGCGGT TGCCGCTGTC GCGGAGCGTT TCGGCGCAAC CCTCCGGGGC
GTGTGA
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| Protein sequence | MRVSVSWLRE YVDLPAHLTP ADLEQSLVGL GLEVESIVDL AGTVTGPLVV GEVREIEELT
GFKKPIRFCR VDVGDANGTG ELQEIVCGAR NFAVGDRVVV ILPGGVLPGN FAIGARRTYG
RNSRGMICSA KELGLGDDHA GIIVLPGSSP AKPGDDARPV VGLDDVVVEV ELTPDRGYQM
SVRGIARELS HAFGVPFRDP GLASAPAGTE APAYPVEVRD PVGCDRFAAR MVRGVNPAAP
SPAWMVQRLT TAGIRSLSLP VDITNYVMLE LGQPMHAFDA DRITGSLVVR RAVAGEQLTT
LDGVVRTLVA EDMVISDAGL PNPNPAAGAD AGAPISLAAV MGGESSEVVA ETSNVLFEAA
HWDPVMVGRT ARRHRLFSAA AKRWERGVDP ALPLVAIDRA VRLLVEHGGG ATGAEILDID
HRTSPVPVVM PADLPSRRVG VAYPADRVAA LLTEIGCTVA AGPDQLTADP GEVGVAAGGA
VSFVVTPPTW RPDLTDPADL VEEVVRLDGY DRVPAVLPVA PAGRGLTWQQ RRRRAVARML
ADRGYVEVLC SPFVAVELAD QLGLPAGDAR RRAVRLANPL SEEEPALRTT LLGPLLGVLR
RNLGRGQRDL ALYEIGTVFH PRTEAGTPPR MGVEHRPSDA ELAAADAVLP EQPQHVAVVL
AGEVEPGGWW GEGRPAGWAD AVEAARTVLA AAGIPEDRVT VRAVEHAPWH PGRCAQLVVD
GVTVGYAGEL HPAVIAGLEL PRRTAAMELD LDAVPAAPVR QAPVISSFPP ALIDVALVVD
VDVPVAQVQG ALVEGAGELL ESVRLFDVYA GEQLGAGRRS LAYKLTFRAP DRTLTVEEAV
AARDAAVAAV AERFGATLRG V
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