Gene Strop_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1879 
SymbolhisE 
ID5058338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2147570 
End bp2147872 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content69% 
IMG OID640474149 
Productphosphoribosyl-ATP pyrophosphatase 
Protein accessionYP_001158719 
Protein GI145594422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.159901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCCGC GTCGGCCGGC CGGTTGCGAG AATCGACCTG TGAAGACGTT CGAGGAGTTG 
TTCGCCGAGC TGCAGGCCAA GGCCGCTGCC GGCACCCCCG GCTCGGGCAC CGTCGCGGCC
CTGGACAAGG GGGTGCACTT CGTCGGCAAG AAGGTCGTCG AGGAGGCGGC CGAGTCCTGG
CTGGCGGCCG AGCACGAGGG GCCCGAGCGG ACCGCCGAGG AGATCTCCCA GCTGCTCTAC
CAGGTGCAGG TGTTGATGCT CGCCACCGGT CTCGACCTTG AGGACGTCTA CCGACATCTG
TGA
 
Protein sequence
MEPRRPAGCE NRPVKTFEEL FAELQAKAAA GTPGSGTVAA LDKGVHFVGK KVVEEAAESW 
LAAEHEGPER TAEEISQLLY QVQVLMLATG LDLEDVYRHL