Gene Strop_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1863 
Symbol 
ID5058322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2129792 
End bp2131003 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content71% 
IMG OID640474133 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_001158703 
Protein GI145594406 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCC GGATTGTCCT CGGGGTCGGT GGCGGGATCG CCGCGTACAA GGCTTGCGAG 
TTGCTGCGGC TGTTCACGGA GTCCGGTCAC CGGGTCCGCG TTGTGCCGAC CGCCTCGGCG
CTTCACTTCG TCGGGGCCGC GACCTGGTCG GCGCTCTCCG GTCAACCAGT CGCCGACGAC
GTGTGGTCCG ACGTGCACGA GGTGCCGCAC GTGCGGCTGG GTCAGCAGGC GGACCTGGTC
GTGGTGGCTC CGGCCACCAC CGATCTGCTT GCCCGGGCCG CTCATGGGCT CGCCGACGAC
CTGCTCACCA ACACCCTGCT GACGGCCCGT TGCCCGATCG TCCTGGCGCC GGCGATGCAT
ACCGAGATGT GGGAACATCC GGCGACGGTG GCCAACGTGG CGACGCTGCG CTCCCGTGGG
GTGCGGGTCG TCGAGCCGGC GGTCGGCCGG CTTACCGGGA TGGACACCGG CAAAGGGCGG
CTACCGGATC CGGCGGAGCT CTTCGCCGTG GCCCGACGCG TTCTCACTCG CGGCGCCGCC
GCCCCAGCGG ACCTCACCGG GAAGCACGTG CTGGTCACCG CCGGGGGCAC CCGGGAGCCG
CTCGACCCGG TCCGGTTCCT CGGTAATCGC TCCTCCGGCA AGCAGGGATA CGCGTTCGCC
CGCGCCGCCG TAGCGCGGGG AGCCCGGGTC ACCCTGGTCT CCGCCAACGT CGCGCTGCCC
GAACCAGCCG GCGTGGATCT GGTCCGGGTC GGCACGACCG CCGAGCTTCG AGACGCCACG
CTGACGGCTG CCGGTGGAGC GGACGTGGTG GTGATGGCGG CGGCTCCCGC CGATTTCCGC
CCCGCGACGT ACGCGACTGG CAAAATCAAG AAGTCGGACG ACGGTGGCGC ACCCACCATC
GAGCTCGTCG CGAACCCGGA CATCGCCGCC GAGCTCGGGA AGCATCGTCG CCCGGAGCAG
GTGTTGGTGG TGTTCGCCGC GGAGACCAGC GACGCCGAGG CCAACGGCCG AGCCAAGCTC
GCCCGGAAGC GGGCGGACCT CATCGTCATC AACGAGGTTG GCCCGGACCG GGTTTTTGGC
GCCGACACCA ACGCGGCGAC CGTCATCGGC GCGGACGGAT CGGCCAGCCG GATGCCCGAG
CAGTCCAAGG AAGATCTCGC CGACGGTGTC TGGGATCTCA TCGTCTCCCG GCTGGCCGGC
CGTCCCGGAT AG
 
Protein sequence
MSPRIVLGVG GGIAAYKACE LLRLFTESGH RVRVVPTASA LHFVGAATWS ALSGQPVADD 
VWSDVHEVPH VRLGQQADLV VVAPATTDLL ARAAHGLADD LLTNTLLTAR CPIVLAPAMH
TEMWEHPATV ANVATLRSRG VRVVEPAVGR LTGMDTGKGR LPDPAELFAV ARRVLTRGAA
APADLTGKHV LVTAGGTREP LDPVRFLGNR SSGKQGYAFA RAAVARGARV TLVSANVALP
EPAGVDLVRV GTTAELRDAT LTAAGGADVV VMAAAPADFR PATYATGKIK KSDDGGAPTI
ELVANPDIAA ELGKHRRPEQ VLVVFAAETS DAEANGRAKL ARKRADLIVI NEVGPDRVFG
ADTNAATVIG ADGSASRMPE QSKEDLADGV WDLIVSRLAG RPG