Gene Strop_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1849 
Symbol 
ID5058308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2115747 
End bp2116304 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID640474119 
Productelongation factor P 
Protein accessionYP_001158689 
Protein GI145594392 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.583476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA CCAACGACCT GAAAAACGGC ATGGTACTCA ACCTCGACGG TGAGCTCTGG 
GCCGTCGTCG AGTTCCAGCA CGTCAAGCCC GGAAAGGGTG GTGCGTTCGT GCGCACCACG
CTGAAGAACG TGCTCTCCGG CAAGGTGGTC GACAAGACCT TCAATGCGGG CACCAAGGTC
GAGACCGCGA CCGTTGACAA GCGTACGATG CAGTACCTGT ACGCCGACGG CGAGGACTTC
GTCTTCATGG ACCTGGAGAC GTTCGACCAG ATCAACGTGC TCGGCGACAC GGTCGGCGAG
GCCGCGAACT ACCTGCTGCC CGAGGCCGAG GCGACTGTCG CCACCCACGA GGGTGTGCCG
CTCTACGTGG AGCTGCCGAC CAGCGTGGTG CTCGAGATCA CCTATACCGA GCCCGGCCTC
CAGGGAGACC GTTCGACCGG TGGTAGCAAG CCGGCCACGG TCGAGACCGG CGCGACCGTG
CAGGTGCCGC TCTTCATCAC CACCGGCGAG AAGATCAAGG TCGACACCCG CGACGGCCGT
TACCTCGGCC GCGCCTGA
 
Protein sequence
MATTNDLKNG MVLNLDGELW AVVEFQHVKP GKGGAFVRTT LKNVLSGKVV DKTFNAGTKV 
ETATVDKRTM QYLYADGEDF VFMDLETFDQ INVLGDTVGE AANYLLPEAE ATVATHEGVP
LYVELPTSVV LEITYTEPGL QGDRSTGGSK PATVETGATV QVPLFITTGE KIKVDTRDGR
YLGRA