Gene Strop_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1846 
SymbolaroK 
ID5058305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2113497 
End bp2114000 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content72% 
IMG OID640474116 
Productshikimate kinase 
Protein accessionYP_001158686 
Protein GI145594389 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGG TCTGCGTCCT GGTCGGTGCA CCTGGCTCGG GTAAGACCAC CGTCGGGCGA 
GCGCTCGCCG AGTTGCTCGG AGTGGAGTTC CGGGACACCG ATCTCGACAT CGAGGCGACG
GTGGGCAAGC CGATCTCGGA GATCTTCATT GACGAGGGGG AGGCGCATTT CCGTACCCTC
GAACGGGCGG CGGTGGCGAC GGCGCTCGCC ACCACCGCCG GCGTGCTCGC CCTCGGCGGT
GGTGCGGTGC TCGCCGAGGA GACCCGGTCC GCGCTGGTTG GCCACACCGT CGTGCACCTG
TCGGTGGAGC TGCCCGACGC GGTACGCCGG GTCGGGCTCG GTGCGGGGCG ACCCCTGCTC
GCGGTCAACC CCCGTGCCAC CCTCAAGTAT CTGTTGGAGC AGCGCCGGCC GCACTACGCG
GCGGTGGCGA CGGCGACGGT CGTGACCGAC GGCCGGACGC CGGAGCAGCT CGCGGTCGAG
GTCGCCGCGC TGCTCCCCTC CTGA
 
Protein sequence
MAPVCVLVGA PGSGKTTVGR ALAELLGVEF RDTDLDIEAT VGKPISEIFI DEGEAHFRTL 
ERAAVATALA TTAGVLALGG GAVLAEETRS ALVGHTVVHL SVELPDAVRR VGLGAGRPLL
AVNPRATLKY LLEQRRPHYA AVATATVVTD GRTPEQLAVE VAALLPS