| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1833 |
|---|
| Symbol | |
|---|
| ID | 5058292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2099949 |
|---|
| End bp | 2100491 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640474103 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_001158673 |
|---|
| Protein GI | 145594376 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00362387 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCA TTCGCCGTGG TCTTGGGGTG AGAGCCCTGT TCGCGCTGAA GCGTGGCTGG
TACCGGCTGC GCTACCCGGG ACTGAGCCTC GGCCGGGACG TGGAGATCCG TGGGCGGGTC
CGGTTGCGCC GTGGCGTGCG GGTGCACATC GGTGACCGGA CCCGGATCAA CAAGCTGGTG
CGGTTCGCCG GTCCGGGCGA GGTCCGAGTC GGTGCCGACT GTCTGTTGAG CGCGACCTGG
GTCGGTGTTT GGACCTCGGT CAGGGTCGGT GACCGTTGTC TGCTGTCGAA TTGTGAGCTG
CGGGACAGCG ACTTCCATAA CCTGCGGCCC GAGGTGCGAC ACGACCCGCC CACCCCACGC
ACTCGAGCCC CGATCGTCAT TGAGGACAAC GTCTGGATCG GCGCACATGC GCTCGTGATG
AAGGGTGTTC GGATCGGCCG GGACAGTGTC GTGGGCGCCG CCACGGTCGT CCGGGCGGAT
GTCCCGCCCC GGGTGGTGGT CATTGGAAAT CCGCAACAGA CGGTGAAGAA ATTCAATGAA
TAG
|
|---|
| Protein sequence | MSGIRRGLGV RALFALKRGW YRLRYPGLSL GRDVEIRGRV RLRRGVRVHI GDRTRINKLV
RFAGPGEVRV GADCLLSATW VGVWTSVRVG DRCLLSNCEL RDSDFHNLRP EVRHDPPTPR
TRAPIVIEDN VWIGAHALVM KGVRIGRDSV VGAATVVRAD VPPRVVVIGN PQQTVKKFNE
|
|---|
| |