| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1821 |
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| Symbol | aspS |
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| ID | 5058280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2083579 |
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| End bp | 2085402 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474091 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001158661 |
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| Protein GI | 145594364 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00584627 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.950731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCGTA CCCATGACGC CGGAAGCCTG CGCGCGACGG ACGCCGGCAG CACGGTGACG
CTCGCCGGCT GGGTGGCCCG CCGGCGCGAC CACGGCGGTG TCATCTTTGT CGACCTGCGT
GACGGCTCCG GGGTGGCCCA GGTCGTCCTC CGCGAGGAGG ACGCCCACGT GCTGCGCAAC
GAGTACTGCG TCCGGGTCAC CGGCGAGGTG ACCCGTCGGC CCGAGGGGAA CGAGAACCCG
GAACTCGCCA CCGGCGAGGT CGAGGTGACG GCGGAGGAGT TGGAGGTGCT GTCCGAGGCG
GCGCCCCTGC CGCTGCCGGT GGACGACCAG ATCGAGGCCG GAGACGACGT CCGACTGCGC
TACCGGTACC TGGACCTGCG CCGTAGTGGC CCGGCCAGCG CCCTGCGCCT GCGGTCTGCG
GCCAACCAGA TCGCGCGTAC GGTGCTGCAC GAGCGGGACT TCCTGGAGAT CGAGACCCCG
ACGTTGACCC GCTCCACGCC GGAGGGGGCA CGCGACTTCC TGGTGCCGGT CCGGTTGCAG
CCCGGCACCT GGTACGCGCT GCCCCAGTCG CCGCAGTTGT TCAAGCAGCT GCTGATGGTG
GGCGGGATGG AGCGGTACTA CCAGATCGCC CGCTGCTACC GGGACGAGGA CTTCCGCGCC
GACCGGCAGC CGGAGTTCAC CCAGCTGGAC ATCGAGATGT CCTTCGTCAC CGAAGACGAC
GTGATTGACC TCGGCGAGGC GATCGTGTCC CGGCTGTGGC GGGAACTGGC CGGCCACCAG
ATCACCCGGC CGATCCCGCG GATCACCTGG CACGAGGCCA TGGCCCGGTA CGGCTCGGAC
AAGCCAGACC TGCGCTACGG CGTGGAGTTG ACCGAGCTGA CCGACTACCT GCGCGGCACC
CGGTTCCGGG TCTTCGCCGG CGCGATCGAG GCGGGTGGCT ACGTTGGTGC GGTCGTGATG
CCCGGCGGTG CGGCGCAGTC CCGTAAGGAG TTGGACGGCT GGCAGGACTG GGCCAAGGCG
CGGGGTGCGA AGGGCCTGGC GTACGTGGTG CTCGACGCCG AGACGGGCGA GGCGCGGGGT
CCGGTCGCCA AGAACCTCTC CACGGAGCAC CTGGCGGGCC TGGCCGACGT GGTTGGCGCG
AAGCCCGGCG ACGCGATCTT CTTCGCTGCC GGTGCGGAGA GCCGGGCGGC CCAGGAATTG
CTCGGCGCGG CCCGGGTGGA GATCGCCCGC CGGGCCAACC TGGTTGACGA GAGCGCCTGG
GCGTTCTGCT GGGTGGTTGA CGCGCCGATG TTCGAGCGGG TCACCGACCG CGAGGAGGCT
GGAGCGGGCG GCTGGACCGC GGTGCATCAT CCGTTCACCG CACCGAACGC CGAGTGGATG
GACCGCTTCG AGGAGGCACC GGACCGGGCG CTCGCGTACG CGTACGACAT CGTCTGCAAC
GGCAACGAGA TCGGCGGCGG CTCGATCCGT ATCCACCGCG GCGACGTGCA GCAGCGGGTC
TTCGACCTGC TCGGCATCAC GCCCGAGCAG GCGCGGGACA AGTTCGGCTT CCTGCTGGAG
GCGTTCAAGT ACGGCCCGCC GCCGCACGGC GGTATCGCCT TCGGCTGGGA CCGGGTCTGC
ATGCTGCTCG CCGGCGCCGA CTCGATTCGT GAGGTCATCG CCTTCCCGAA GACCCGCGGC
GGGTTCGACC CGCTGACTGC CGCGCCGACC CCGATCACCG CCGCGCAGCG CCTGGAGGCG
GGCGTGGACG CCCGGCCCAA GCCCGAGGCG CGGGCGCAGG CCGGCACCGC CGGCCCGGCT
GCTCCGGTGG CCGACCCCAC CTGA
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| Protein sequence | MIRTHDAGSL RATDAGSTVT LAGWVARRRD HGGVIFVDLR DGSGVAQVVL REEDAHVLRN
EYCVRVTGEV TRRPEGNENP ELATGEVEVT AEELEVLSEA APLPLPVDDQ IEAGDDVRLR
YRYLDLRRSG PASALRLRSA ANQIARTVLH ERDFLEIETP TLTRSTPEGA RDFLVPVRLQ
PGTWYALPQS PQLFKQLLMV GGMERYYQIA RCYRDEDFRA DRQPEFTQLD IEMSFVTEDD
VIDLGEAIVS RLWRELAGHQ ITRPIPRITW HEAMARYGSD KPDLRYGVEL TELTDYLRGT
RFRVFAGAIE AGGYVGAVVM PGGAAQSRKE LDGWQDWAKA RGAKGLAYVV LDAETGEARG
PVAKNLSTEH LAGLADVVGA KPGDAIFFAA GAESRAAQEL LGAARVEIAR RANLVDESAW
AFCWVVDAPM FERVTDREEA GAGGWTAVHH PFTAPNAEWM DRFEEAPDRA LAYAYDIVCN
GNEIGGGSIR IHRGDVQQRV FDLLGITPEQ ARDKFGFLLE AFKYGPPPHG GIAFGWDRVC
MLLAGADSIR EVIAFPKTRG GFDPLTAAPT PITAAQRLEA GVDARPKPEA RAQAGTAGPA
APVADPT
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