| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1813 |
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| Symbol | |
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| ID | 5058272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2073465 |
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| End bp | 2074649 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474084 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001158654 |
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| Protein GI | 145594357 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.126223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTG CTGGTCTCGC GAGTCGCCTC TACCGTGGTG AGGCCGGTCT CGACATTGTC
GGCCGTCGCA GGGTGTGGTT CAGCGTCGCT GGGGCGCTGG CCCTGATCTC GGTGCTGAGC
TTCGCGTTCC TCCGGTTCGA CCTCGGTATC GAGTTCGCCG GCGGCAACTC GATCCAGGTG
CCCGCCAGCG TCGGCACCCT GGAGCAGGCC GAGGAGGCGG TTGACGCCGC GCTGGCCGCG
GAGGGCGGCG GAGCGGAGGT GGTCACCGCG CAGAAGGTCG GCGGTACCGG TGACGACTTC
TACGAGATGC GTACCTCGCA GCTCAGCGCG GAGCAGGCCA ACGCGGTCAA GGCGGCGGTA
GCCCAGGAGT TCGGCCTCCC GGTCAGCGAC GTCGGCGGCG AGCAGGTCAG CCAGGCCTGG
GGCAGCCAGG TCACCGAGCG GGCGGTGCTC GGTCTGGTGA TCTTCCTCGT GCTGGTGATG
GTCTACCTGG TGCTGCGCTT CGAGTGGCGG ATGGCGGTCG GCGCGGTCAG CTCCCTGCTG
ATGAACCTGG TTCTCAGTGC CGGCATCTAC TCACTGGTCG GCTTCGAGGT GACCCCGTCG
ACCGTGATCG GCTTCCTCAC CATTCTGGGC TTCGCGCTCT ACGACGTGGT GGTGGTCTTC
GACAAGGTCC AGGAGAACAC CCGCGGCATC ACCGCGAACA ACAACCAGAC GTACGGCGAG
GCGGCCAACC TGGCGATCAA CCAGAGCCTG ATGCGGTCGC TGAACACCTC GATCGTGGCC
CTACTCCCGG TCGGCGGCCT GCTGTTCATC GGAGCCGGCT TCTTCGGCGC CGGCACCCTG
AAGGACCTCG GCCTGGTGCT GTTCGTCGGG ATGGCGGTGG CGTTCTTCTC CTCGATCACC
CTGGCCACCC CGCTGCTGGT GCTGCTGAAG AACCGGGAGC CGCGGATCCA GGCGCACAAC
AAGCGGGTGC TGACCCGCCG CGCGGCGCTG GAGCGCGGCG AGGGCTCGGC GAAGAACGCG
CCGCAGCCGA CGGAGAGCGC CGACGAGGAG ATCGACCCGG AGGCGACGGC CCTCGCCGGT
GCGGCACCGA AGGTGGGGGC ACGGCCGGCC GGTAAGCGGC CGACCGGCGC GCGCGGTGGG
CGATCCGCCG GCGGTGGCAA CCGTCCGGGC GGCAAGCGGC GCTGA
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| Protein sequence | MAGAGLASRL YRGEAGLDIV GRRRVWFSVA GALALISVLS FAFLRFDLGI EFAGGNSIQV
PASVGTLEQA EEAVDAALAA EGGGAEVVTA QKVGGTGDDF YEMRTSQLSA EQANAVKAAV
AQEFGLPVSD VGGEQVSQAW GSQVTERAVL GLVIFLVLVM VYLVLRFEWR MAVGAVSSLL
MNLVLSAGIY SLVGFEVTPS TVIGFLTILG FALYDVVVVF DKVQENTRGI TANNNQTYGE
AANLAINQSL MRSLNTSIVA LLPVGGLLFI GAGFFGAGTL KDLGLVLFVG MAVAFFSSIT
LATPLLVLLK NREPRIQAHN KRVLTRRAAL ERGEGSAKNA PQPTESADEE IDPEATALAG
AAPKVGARPA GKRPTGARGG RSAGGGNRPG GKRR
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