Gene Strop_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1811 
Symbol 
ID5058270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2070912 
End bp2071247 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content65% 
IMG OID640474082 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001158652 
Protein GI145594355 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.690098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTTGG CACAAGAAAA CTCCGCCAGC AACTTCACTC CCATCCTCAT GATCGTCCTG 
CTCTTCGGAG TCATGTACTT CATGATGATC CGTCCGCAGC AGAAGCGGCG TCGGGAAGCG
GCGAACATGC AGTCCTCGCT GGGGCACGGT GACGAGGTCG TCACCATCGG CGGGCTGTAT
GGCACCGTCA CCGGTGTGGA CGACGAGACG GTGCTGCTGG AGGTCGCCCC CGGCGTGGAG
ACCCGCTACG CCCGTCCCGC GATTGCACGG GTCGTCACCA AGGCGGAGCA GCCCGCTGAG
GCGGCGGTCG ACGACGCGGA CGCGGTCAAG GAGTAA
 
Protein sequence
MLLAQENSAS NFTPILMIVL LFGVMYFMMI RPQQKRRREA ANMQSSLGHG DEVVTIGGLY 
GTVTGVDDET VLLEVAPGVE TRYARPAIAR VVTKAEQPAE AAVDDADAVK E