Gene Strop_1809 details

Gene Information

• Locus tag: Strop_1809
• Symbol: ruvA
• ID: 5058268
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: +
• Start bp: 2069050
• End bp: 2069652
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 640474080
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001158650
• Protein GI: 145594353
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGCCA GTGTCCGGGG CGTGGTGACC GCGACCGGTC CCGACCACGC CGTCCTGGAG 
GTCGGCGGGG TGGGCCTGGC GGTGCAGTGC GCGCCGGGCA CGATCGCCGA CCTGCGGGTG 
GGCCAGCCGG CCCGCCTCGC CACCAGCCTG GTCGTCCGGG AGGATTCGCT GACCCTCTAC 
GGGTTCGCCG ACGACGACGC CAAGGCTCTG TTCGAGCTCC TGCAGACGGC CAGCGGGGTC 
GGCCCTCGAC TGGCCCAGGC CGTCCTCGCG GTGCACCCGC CGGAGGCGGT CCGCGCGGCC 
ATCGCCAACG CCGACACCGC CGCGTTGACC CGGGTGCCGG GCATCGGCAA GAAGGGCGCC 
GAGCGGCTCG TACTGGAGCT GCGGGACCGG ATCGGTCCGG TCCCGGTCGG TGCCGACTCC 
GCCGCCGGCG TCACGACCGG TGCCTGGCCG GAGCAGGTGC GTCAGGCCCT GGTCGGGCTC 
GGCTGGACGG CGGCGCAGGC GGATCAGGCG GTCACCGCGG TGGCGGAGAC GGTGGACGGG 
GCGGTGCCCC CGGTGCCGGT CCTGCTCCGA CAGGCGATTC GGCTGCTGGG TCGGACCCGA 
TGA 

 

Protein sequence

MIASVRGVVT ATGPDHAVLE VGGVGLAVQC APGTIADLRV GQPARLATSL VVREDSLTLY 
GFADDDAKAL FELLQTASGV GPRLAQAVLA VHPPEAVRAA IANADTAALT RVPGIGKKGA 
ERLVLELRDR IGPVPVGADS AAGVTTGAWP EQVRQALVGL GWTAAQADQA VTAVAETVDG 
AVPPVPVLLR QAIRLLGRTR