| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1808 |
|---|
| Symbol | ruvC |
|---|
| ID | 5058267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2068571 |
|---|
| End bp | 2069053 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640474079 |
|---|
| Product | Holliday junction resolvase |
|---|
| Protein accession | YP_001158649 |
|---|
| Protein GI | 145594352 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
|---|
| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGAGG GCATGCCGGG GCGCCCCTGC ACGTTGGTCG CCTACCACGT CGTCCACACC
GATCCCGATG ACGAGTTGCC GCTGCGCCTG CTGACCCTGG ATCGCTCGCT CACCGCCCTG
GTGGCCGAGC ACCGGCCGGA CAGCGTGGCC GTCGAGCGGG TGTTCAGCCA GCACAATGTC
CGCACGGTGA TGGGCACCGC CCAGGCCAGC GGGGTCGCCG TTCTCGCCGG GGCGCGGGCG
GGCCTTCCGG TGCAGACCTA CACTCCGAGC GAGGTGAAGG CGGCGGTGAC CGGCTCCGGT
CAGGCCGACA AGGCCCAGAT GACCGCGATG GTGACGCGGC TGTTGCGGCT GTCCGCCCCG
CCCCGCCCGG CGGACGCCGC CGATGCCCTG GCCCTGGCCA TCTGCCACGT GTGGCGCGGT
GGTACCCGCT CGAAGTTGGC GACCGCCGCC GATCGGGCAC GACGACGAGG AGGAGGACGA
TGA
|
|---|
| Protein sequence | MVEGMPGRPC TLVAYHVVHT DPDDELPLRL LTLDRSLTAL VAEHRPDSVA VERVFSQHNV
RTVMGTAQAS GVAVLAGARA GLPVQTYTPS EVKAAVTGSG QADKAQMTAM VTRLLRLSAP
PRPADAADAL ALAICHVWRG GTRSKLATAA DRARRRGGGR
|
|---|
| |