| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1798 |
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| Symbol | dnaE |
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| ID | 5058257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2054610 |
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| End bp | 2058143 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640474069 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001158639 |
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| Protein GI | 145594342 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.277174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATT CGTTCGCGCA TCTGCACGTG CACACAGAGT ATTCGATGCT CGACGGCGCG
GCCCGGTTGA AGGACTTGTT CGCCGAGGTC AACCGGCAGG GGATGCCGGC CGTGGCGATG
ACCGACCACG GCAACATGCA CGGCGCGAAC GACTTCTACA AACAGGCCAT GGCCGCTGGC
GTCAAGCCGA TCCTGGGGAT CGAGGCGTAC GTCGCGCCGG AGTCGCGGTT CCACAAGAAG
CGGGTGCGTT GGGGGCGGCC GGAGCAGAAG AGCGACGACG TCTCCGGCAG CGGTGGGTAC
ACCCACATGA CCATCTGGGC GAAGAACAAG GTGGGGCTGC ACAACCTGTT CAAGCTGACC
AGCCGGTCGT TCACCGAGGG GTTCTTCGTC AAGTGGCCAC GGATGGACAC GGAGCTCCTC
GCTGAGCACT CCGAGGGGTT GATCGCCACC ACCGGCTGTC CCTCCGGTGA GGTGCAGACC
CGGCTACGGC TGGACCAGTA CGACGAGGCG CTGAAGGCCG CCGCGAAATA CCAGGACATC
TTCGGTAAGG AGAACTTCTT CCTGGAGGTG ATGGACCACG GCATCGACAT CGAACGCCGG
GTTCGTCAGG AGCTGGCGGA GATCTCCCAC AAGCTGGATA TCCCGCCGGT GGTGACCAAC
GACTCGCACT ACACCTACCA GGCGCAGTCC GAGGCACACG ACGTGCTGCT CTGCGTGCAG
ACCGCGGCGA ACGTCGCCGA TCCGAACCGG TTCCGGTTCG ACGGCAGCGG CTACTACATC
AAGTCCGCCG ACGAGATGCG CGGCGTCGAC TCCTCCGAGC TGTGGCGCGC GGGCTGCCGG
AACACCCTGC TGGTCGCGGA GATGGTCGAC CCGGCCGGGA TGTTCGACTT CCGGAACCTG
ATGCCGCGTT TCCCGGTGCC GGAGGGGGAG ACCGACGAGT CCTGGTTCCG CAAGGAGACG
TTCAAGGGGC TCGCCCGCCG CTTCCCGAAC GGCGTCCCGG AGACCCACCT CAAGCAGGCC
GAGTATGAGC TGGGCGTCAT CATCCAGATG GGGTTCCCGT CCTACTTCCT CGTGGTGGCC
GACTTCATCC AGTGGGCCAA GGGCGAGGGG ATCGCCGTGG GCCCGGGCCG CGGCTCGGCC
GCCGGTTCAC TCGTCGCGTA CGCCCTCGGT ATCACCGACC TGGATCCGTT GCCGCACGGC
CTCATCTTCG AGCGGTTCCT CAACCCCGAG CGGGTCTCGA TGCCGGATGT CGACATCGAC
TTCGACGAGC GTCGGCGCGG TGAAGTGATC AAGTACGTCA CGGAGAAGTG GGGCGAGGAC
AAGGTCGCCC AGATCGCGAC CTTCGGCACG ATCAAGGCGA AGGCCGCGAT CAAGGACTCG
GCGCGGGTGC TCGGCTACCC GTACGCGGTC GGTGACCGGA TCACCAAGGC GATGCCGCCG
GCGGTGATGG GCAAGGACAT CCCACTGACC GGCATCTTCG ACCCGCAGCA CTCCCGGTAC
GCGGAGGCCG GCGAGATTCG GGGTCTCTAC GAGTCCGACC CGGATGTCAA GAAGGTCATC
GACACGGCGC GCGGGATCGA GGGGCTGATC CGGCAGACGG GGGTGCACGC CGCCGGGGTC
ATCATGTCCG CCGAGCCGAT CGTCGACCAC ATCCCGTTGA TGCGTCGGGA CGCCGACGGG
GCGATCATCA CGCAGTTCGA CTACCCGACC TGCGAGTCGC TCGGGCTGCT GAAGATGGAC
TTCCTCGGCC TGCGCAACCT GACCATCATC GACGACGCGC TGAAGAACAT CGAGAGTAAC
CACGGGCGCA CGGTCGACCT GCTCCAGCTG CCGCTGGACG ACACGGCGAC CTACGAGCTG
CTGTCCCGGG GCGACACCCT GGGCGTGTTC CAGCTCGACG GCGGGCCGAT GCGGTCGCTG
CTGCGGACGA TGAAGCCGGA CAACTTCGAG GACATCTCCG CGGTCCTGGC GCTGTACCGG
CCGGGCCCGA TGGGCGCCAA CTCACACACC AACTACGCGC TGCGCAAGAA CGGCCTCCAG
GAGATCACTC CGATCCACCC GGAGCTGGCC GAGCCGCTGG AGGAGATCCT CGGCCCCACC
TACGGCCTGA TCGTCTACCA GGAGCAGGTG CAGCGCGCCG CCCAGGTCCT CGCCGGCTAC
AGCCTCGGCA AGGCCGACCT GCTGCGCCGG GCGATGGGCA AGAAGAAGAA GGAGGTTCTC
GACAAGGAGT TCGTGCCGTT CCGCGACGGA ATGCGCGCCA ACGACTACTC CGACGAGGCC
ATCCAGACCC TGTGGGACAT CCTCGTCCCC TTCGCCGACT ACGCCTTCAA CAAGGCCCAC
ACCGCCGGGT ACGGCCTGGT GTCGTACTGG ACCGGCTACC TCAAGGCGAA CTATCCGGCC
GAGTACATGG CGGCGTTGCT CACCTCGGTG GGCGACGACA AGGACAAGAT GGCGCTCTAC
CTGTCGGAGT GCCGCCGGAT GGGCATCCAG GTGCTCCCGC CGGATGTGAA CACCTCGGCC
GGGCCGTTCA CCCCGGTCGG CCGGGACATC CGGTTCGGTC TGGCCGCGAT TCGCAACGTC
GGCGCGAACG TGGTCAGCGC GATCATGCGG TGCCGGGGGG AGAAGGGCGC CTACACCGAC
TTCTACGACT TCCTGTCCAA GGTGGAAGCG GTCGTCTGCA ACAAGAAGAC CATCGAATCC
CTGATCAAGG CGGGGGCGTT CGACTCGCTC GACCATTCCC GCCGGGGCCT GCTCGCGGTG
CACGCCGACG CCATCGACGC GTACGCCGAC GTCAAGCGCA AGGAGGCCGT TGGCCAGTAC
GACCTCTTCG GCGCCGGATT CGCCGACAGC GACGCCGGAC AGAGCACCAC GGTGATGCCG
GTCATCGCCG AGGGGGAGTG GGACAAGCGG GAGAAGCTCG CCTTCGAGCG CGAGATGCTC
GGCCTCTACG TCTCCGACCA TCCGCTGTTC GGCCTGGAGC ATGTGCTCGG TGCGGCGGCC
GACACCACCA TCGCGGCCCT CTCCGAGGAA GGAACGGTTC CGGACGGGAC GGTGGTGACC
CTCGCGGGCA TCCTCTCCGG AGTGCAGCGC CGGGTCACCA AGCAGGGCCG GGCGTGGGCG
TCGGCGACGC TTGAGGACCT GGCCGGCGGG GTGGAGACGC TGTTCTTCCC CAACACCTAC
GAGGTGATCG GGGAGTACAT TGCCGAGGAC GCGATCGTGG TGGTCAAGGG GCGGGTCGAC
CGCCGGGACG ACACGCCGCG GATCATGGCC ATGGACATGT CGATTCCGGA TGTCAGCAGC
AATTCGGCGA ACAAGCCGGT CACGCTCACC ATCCCGGTCA CCCGCTGCAC GCCGCCGTTG
GTGGAGCGGC TCAAGGAGAC CCTGGTGCTG CACCCCGGCG ACGCGGAGGT GCACGTCAAG
CTTCTCAACG GCAGCAAGGT GACCCGGCTG CGACTCGGCC CGTTCCGGGT GGCGCCGACG
ACCGCCCTGA TGGCCGACCT GAAGACCGTC CTCGGCCCGG CCAACGTGGG CTGA
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| Protein sequence | MGDSFAHLHV HTEYSMLDGA ARLKDLFAEV NRQGMPAVAM TDHGNMHGAN DFYKQAMAAG
VKPILGIEAY VAPESRFHKK RVRWGRPEQK SDDVSGSGGY THMTIWAKNK VGLHNLFKLT
SRSFTEGFFV KWPRMDTELL AEHSEGLIAT TGCPSGEVQT RLRLDQYDEA LKAAAKYQDI
FGKENFFLEV MDHGIDIERR VRQELAEISH KLDIPPVVTN DSHYTYQAQS EAHDVLLCVQ
TAANVADPNR FRFDGSGYYI KSADEMRGVD SSELWRAGCR NTLLVAEMVD PAGMFDFRNL
MPRFPVPEGE TDESWFRKET FKGLARRFPN GVPETHLKQA EYELGVIIQM GFPSYFLVVA
DFIQWAKGEG IAVGPGRGSA AGSLVAYALG ITDLDPLPHG LIFERFLNPE RVSMPDVDID
FDERRRGEVI KYVTEKWGED KVAQIATFGT IKAKAAIKDS ARVLGYPYAV GDRITKAMPP
AVMGKDIPLT GIFDPQHSRY AEAGEIRGLY ESDPDVKKVI DTARGIEGLI RQTGVHAAGV
IMSAEPIVDH IPLMRRDADG AIITQFDYPT CESLGLLKMD FLGLRNLTII DDALKNIESN
HGRTVDLLQL PLDDTATYEL LSRGDTLGVF QLDGGPMRSL LRTMKPDNFE DISAVLALYR
PGPMGANSHT NYALRKNGLQ EITPIHPELA EPLEEILGPT YGLIVYQEQV QRAAQVLAGY
SLGKADLLRR AMGKKKKEVL DKEFVPFRDG MRANDYSDEA IQTLWDILVP FADYAFNKAH
TAGYGLVSYW TGYLKANYPA EYMAALLTSV GDDKDKMALY LSECRRMGIQ VLPPDVNTSA
GPFTPVGRDI RFGLAAIRNV GANVVSAIMR CRGEKGAYTD FYDFLSKVEA VVCNKKTIES
LIKAGAFDSL DHSRRGLLAV HADAIDAYAD VKRKEAVGQY DLFGAGFADS DAGQSTTVMP
VIAEGEWDKR EKLAFEREML GLYVSDHPLF GLEHVLGAAA DTTIAALSEE GTVPDGTVVT
LAGILSGVQR RVTKQGRAWA SATLEDLAGG VETLFFPNTY EVIGEYIAED AIVVVKGRVD
RRDDTPRIMA MDMSIPDVSS NSANKPVTLT IPVTRCTPPL VERLKETLVL HPGDAEVHVK
LLNGSKVTRL RLGPFRVAPT TALMADLKTV LGPANVG
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