| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1792 |
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| Symbol | |
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| ID | 5058251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2047354 |
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| End bp | 2048103 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640474063 |
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| Product | hypothetical protein |
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| Protein accession | YP_001158633 |
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| Protein GI | 145594336 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.165315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGGCC ACTCAAAGTG GGCGACGACC AAGCACAAGA AGGCGGTCAT CGACGCCAAG
CGCGGCAAGA TGTTCGCCAA GCTGATCAAG AACGTCGAGG TCGCGGCGCG TACCGGCGGC
GGTGATCCGG CTGGCAACCC GACGCTCTAC GACGCGATCC AGAAGGCCAA GAAGAACTCG
GTCCCCAACG ACAACATCGA CCGTGCGGTC AAGCGTGGCT CCGGTCTCGA GTCCGGTGGC
GCGGACTACC AGACGGTTAT GTACGAGGGC TATGGGCCCA ACGGGGTCGC GCTGTTGATC
GAGTGTCTGA CCGACAACCG TAATCGTGCT GCCACTGAGG TGCGGACCGC CCTGACCCGC
AACGGCGGCT CGTTCGCCGA TGCCGGATCG GTGTCGTACC TGTTCAGCCG CAAGGGCGTG
GTGATCGTGG CCAAGGCCGG CACCACCGAG GACGACGTGA TGCTGGCCGT CCTGGACGCG
GGTGCGGAGG AGGTCAACGA CCTGGGTGAG GCGTTCGAGG TGCTCTCCGA GCCGGGCGAC
CTGGTCGCGG TGCGTACCGC CTTGCAGGAC GCCGGCATCG AGTACGAGTC GGCGGAGTCC
TCGCTGGTCC CGAGCGTCAG CGTCCCGGTG GACGAGGAGG GCGCTCGGAA GATTCTCAAG
CTGATCGATG TGCTGGAGGA CTGCGACGAC GTGCAGAACG TCTTCGCGAA CTTCGACGCC
TCCGACGAGC TGCTCGCGAA GCTCGGCTGA
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| Protein sequence | MSGHSKWATT KHKKAVIDAK RGKMFAKLIK NVEVAARTGG GDPAGNPTLY DAIQKAKKNS
VPNDNIDRAV KRGSGLESGG ADYQTVMYEG YGPNGVALLI ECLTDNRNRA ATEVRTALTR
NGGSFADAGS VSYLFSRKGV VIVAKAGTTE DDVMLAVLDA GAEEVNDLGE AFEVLSEPGD
LVAVRTALQD AGIEYESAES SLVPSVSVPV DEEGARKILK LIDVLEDCDD VQNVFANFDA
SDELLAKLG
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