| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1790 |
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| Symbol | |
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| ID | 5058249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2045516 |
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| End bp | 2046436 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474061 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001158631 |
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| Protein GI | 145594334 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0945843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGATT CTCAGACTTC GAATTCTTCC ACCAACGCCC CGGTCACCGG TACCGCCCAC
GTGAAGCGGG GGATGGCCGA GATGCTCAAG GGCGGTGTGA TCATGGACGT GGTCACCGCA
GAGCAGGCCA AGATCGCTGA GGACGCCGGT GCGGTCGCGG TGATGGCGCT GGAGCGCGTC
CCCTCGGACA TCCGGGCCCA GGGCGGGGTC TCCCGGATGA GCGATCCGGA CATGATCGAC
AGCATCATGG ACGCGGTCTC GATCCCGGTC ATGGCCAAGG TCCGGATCGG TCACTTCGTC
GAGGCGCAGA TCCTCCAGTC GCTCGGTGTC GACTACGTCG ACGAGTCGGA GGTACTGACC
CCGGCGGACT ACGCGAACCA CGTCGACAAG TGGGCCTTCA CGGTGCCCTT CGTCTGTGGC
GCGACCAATC TGGGCGAGGC GCTGCGGCGG ATCACCGAGG GCGCGGCCAT GATCCGGTCG
AAGGGTGAGG CCGGCACCGG CGACGTCTCC AACGCCACCA CCCACATGCG GGGGATTCGT
ACCGAGATCC GCCGGCTCCA GTCCCTGCCC ACCGACGAGC TGTACCTGGC TGCCAAGGAT
CTCCAGGCGC CGTACGAACT GGTCAAGGAG ATCGCCGAGA CGGGCAAGCT GCCGGTGGTG
CTCTTCACCG CCGGTGGTAT CGCCACCCCG GCCGACGCCG CCATGATGAT GCAGCTCGGT
GCCGAGGGGG TCTTCGTCGG CTCCGGCATC TTCAAGTCCG ACAACCCGGC CCACCGGGCT
GCCGCGATCG TCAAGGCCAC CACCTTCCAC GACGACCCGG AGACGCTGGC CAAGATCTCC
CGCGGGCTCG GCGAGGCCAT GGTCGGTATC AACGCCGGCA CCCTTTCGCA GTCGGACCGC
CTGGCCGAGC GCGGCCGGTG A
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| Protein sequence | MPDSQTSNSS TNAPVTGTAH VKRGMAEMLK GGVIMDVVTA EQAKIAEDAG AVAVMALERV
PSDIRAQGGV SRMSDPDMID SIMDAVSIPV MAKVRIGHFV EAQILQSLGV DYVDESEVLT
PADYANHVDK WAFTVPFVCG ATNLGEALRR ITEGAAMIRS KGEAGTGDVS NATTHMRGIR
TEIRRLQSLP TDELYLAAKD LQAPYELVKE IAETGKLPVV LFTAGGIATP ADAAMMMQLG
AEGVFVGSGI FKSDNPAHRA AAIVKATTFH DDPETLAKIS RGLGEAMVGI NAGTLSQSDR
LAERGR
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