Gene Strop_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1788 
Symbol 
ID5058247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2043672 
End bp2044832 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content71% 
IMG OID640474059 
Productphosphatidylinositol alpha-mannosyltransferase 
Protein accessionYP_001158629 
Protein GI145594332 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATCG GCATCGTGTG CCCGTACTCC CTGGATGTGC CCGGCGGCGT GCAGAACCAC 
GTGATGGATC TCGCCGAGGC GCTGATCGGG CTCGGGCACG AGGTGAGCGT CCTGGCCCCC
GCGGATGAGG AGTCGGACCT GCCGCCGTAC GTGGTGCCGG CTGGTCGGGC GGTTCCGCTG
CCGTACAACG GGTCGGTGGC CCGGGTCGCC TTCGGCCCGG TCTCCACCGC GCGCGTCCGC
CGCTGGATCA ACCGGGGCGA CTTCGACGTG CTGCACGTGC ACGAGCCGCT GGCGCTGAGC
CTGTCGATGC TCGCCGTGCT CTCCGCGCGG GGGCCGGTGG TAGCGACCTT CCACACGGCG
ATGACGCGTT CTCGGGTGCT CGCCGCGGCC CAGGGGGTAC TCCAGATCGT GCTGGAGCGC
ATCACCGCCC GGATCGCGGT GAGCGCCCTG GCACGCAAGG TGCAGGTCGA GCACATGGAC
GGCGGGGCGG TGGAGATCCC GAACGGGGTG GCCGTCGCGA AGTTCGCCGA TGCCCAGCCG
CTGCCGGGCT GGCCAGGGTC GTGCGTTCCC GGCCACGGCG GCACGATCGG CTTCCTCGGT
CGCTTCACCG AAGCCCGGAA GGGCTTCCCG GTGCTGCGGG ACGCGTTCGT GCAGTTGGCC
TCGGAGCGTC CGGGGCTGCG TCTGCTGGTC GCCGGGCCCG GTGATCCGAC CGACCTGTAC
GGCCAGTTCC CGGCCGAGCT GCGGGACCGA ATCACCTTTC TCGGGCTGGT CTCCGAGGAG
GACAAGGCGC GGATGCTGCG GAGCGTCCAC CTCTACGTGG CGCCGAATAC CGGCGGGGAG
TCGTTCGGCA TGATCCTCAC CGAGGCGCTC GCGGCGGGAA CCGCTGTCGT TGCGAGCGAT
CTCGACGCGT TTCGCCGCGT GTTGGATCGG GGCCGCGCCG GCCGCCTGTT TCGGACCGGC
GATCCGGAGG CGTTACAGGC TGCGCTGGCC GACCTCCTGG ACGACGCGGA CGCGCGGGCT
GAGCTGACCG CCTACGCGGA TCAGGTGGTG GCGACCTTTG ACTGGCCCAC GGTTGCCCGC
CGGATTCTCG AGGTGTACGC AGCCGCGATT GAGGCCGCTG ACGGCCGGGT CATCGACCAG
GAGTGGGTGG GGCTGGGCTG A
 
Protein sequence
MRIGIVCPYS LDVPGGVQNH VMDLAEALIG LGHEVSVLAP ADEESDLPPY VVPAGRAVPL 
PYNGSVARVA FGPVSTARVR RWINRGDFDV LHVHEPLALS LSMLAVLSAR GPVVATFHTA
MTRSRVLAAA QGVLQIVLER ITARIAVSAL ARKVQVEHMD GGAVEIPNGV AVAKFADAQP
LPGWPGSCVP GHGGTIGFLG RFTEARKGFP VLRDAFVQLA SERPGLRLLV AGPGDPTDLY
GQFPAELRDR ITFLGLVSEE DKARMLRSVH LYVAPNTGGE SFGMILTEAL AAGTAVVASD
LDAFRRVLDR GRAGRLFRTG DPEALQAALA DLLDDADARA ELTAYADQVV ATFDWPTVAR
RILEVYAAAI EAADGRVIDQ EWVGLG