Gene Strop_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1787 
Symbol 
ID5058246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2042724 
End bp2043656 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content73% 
IMG OID640474058 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001158628 
Protein GI145594331 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTCA CCGAGCTGGC CTACCTCGCG GGGTGGCGTG CGGTCCGGGC ACTGCCCCGG 
CCGGTGGCGG CCACCGTCTT CCGGGCGGGC GCCGACCACA CCTACCGCCG CGGCGGTGGT
GGCACGGCCC GACTCCGCGC CAACCTGCGC CGGGTGGTGG GGCCGGAGGT TTCCGAGGCC
GAGCTGGACG GGTTGGTTCG AGCCGGTCTG CGCTCCTACG CCCGGTACTG GATGGAGACG
TTCCGTCTGC CCACGCTGAG CCGGGCCGAG CTGCTCGCCA GATTCCGGCT TGACCGCGAG
GAGACGCTCG CCGCGGATGT GGCCGCCGGC CGCGGCGCGA TCGTGGCGTT GCCGCACTCC
GGCAACTGGG ACATGGCGGG TGCCTGGGTC GCGGCGATGG GCTGGCCGAT CGCCACCGTC
GCCGAGCGGC TCAAACCCGA GGGGATCTAC CAGCGCTTTC TCGCGTTCCG GCGGGGTCTG
GGGATGGAGA TCCTGCCCAC CCACGGTGGC GAACGGCCCG CCTTCGACGT GCTGGTTGAC
CGGGTGAACG CCGGCTATGT GGTGCCGCTG CTCGCCGACC GGGACCTGTC GGCCCGGGGC
GTGACGGTCG ACTTCTTCGG TGCCCAGACC CGGATGCCGC CCGGCCCGGC CCTGCTGGCG
CTCCGCACCG GTGCGCCGCT CTACGTCGCC TCCTTGTGGT ATGAGCCGGA TGTCGCGTGT
GCCACGATCG AGGGGCCACT GGACCTGCCC GGTCCCGAGC AGGGCCCGCT CGACGTACGG
GTGCGGTTGC TGGCCCAGCG GGTCGCCGAC GGTCTGGCGG CGGGCATAGC CCGGCATCCG
CAAGACTGGC ACATGTTGCA ACGGATGTGG CTGGACCAGC GCGTCACATC CAACGGCGCG
GCGCAGCCCT CGCCGACTGT CGGACAGGTC TGA
 
Protein sequence
MNLTELAYLA GWRAVRALPR PVAATVFRAG ADHTYRRGGG GTARLRANLR RVVGPEVSEA 
ELDGLVRAGL RSYARYWMET FRLPTLSRAE LLARFRLDRE ETLAADVAAG RGAIVALPHS
GNWDMAGAWV AAMGWPIATV AERLKPEGIY QRFLAFRRGL GMEILPTHGG ERPAFDVLVD
RVNAGYVVPL LADRDLSARG VTVDFFGAQT RMPPGPALLA LRTGAPLYVA SLWYEPDVAC
ATIEGPLDLP GPEQGPLDVR VRLLAQRVAD GLAAGIARHP QDWHMLQRMW LDQRVTSNGA
AQPSPTVGQV