Gene Strop_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1785 
Symbol 
ID5058244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2039663 
End bp2041816 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content72% 
IMG OID640474056 
Productelongation factor G 
Protein accessionYP_001158626 
Protein GI145594329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGA AGAGTCAGGA CAAGGGGGTC GCCGGCGCGG TACCGGCGGT GACCCACCCC 
GGAGACATCC GCAACGTGGT GCTCGTCGGG CACTCCGGTG CCGGCAAGAC GACCCTGGTC
GAGGCGTTAC TCGCGGCGAC CGGCACGATC GGCCGCGCCG GGAACGTCGC CGACGGCACC
ACCACCTGCG ACCACGATCC GGCGGCCGTC CGCCAACAGC GGTCGGTGAC CCTGGCCTGC
GCGCCGCTCG TGCACGACGG GATCAAGGTC AACCTGCTGG ACACCCCCGG CTACGCGGAC
TTCGTCGGCG AGCTGCGCGC CGGGCTGCGG GCCGCCGATG CCGCGCTCTT CGTCGTCTCC
GCCGTGGACG GGATGGATGC CACCACCGCC GCGTTGTGGG AGGAGTGCGC GGCCGTGAAC
ATGCCCCGCG CGGTAGCCGT CTCCCGGCTG GACCACCCAC GCGCGGACTT CGACGAGGCG
GTCGCCCTCT GCCAGCGGGT GTTCGGCGAC AACGTGCTCC CGCTCTACCT GCCGATGCTC
GGCGACGACG GCGTCTCCAC CGCCGGACTG CTCGGGCTGA TCACCCGCCG GATCCTCGAC
TACACCGCCG GGCTGCCCGC CGAGGTGCGG CAGCCGGACC CGGAGCACCT GCCGGCGATC
GCCGAGTCCC GCAACGAACT GATCGAGGGG ATCATCGCCG AGAGCGAGGA CGAGACCCTC
ATGGACCGGT ACCTCGAGGG TGCCGAGATC GGCACCGACA TCCTCGTCGA GGATCTGGAG
AAGGCGGTCG CACGCGGTCA CTTCTATCCC GTCGTGCCGG TCTGCGCGCA GACCGGGGTC
GGGCTCGACG CCCTGTTGGA GGTGCTCACC GCGGCTTTCC CCTCACCGCT GGAGCATGAC
CTCCCGGCGG TGACCGGGGT GGACGGCACC CCCCACCCCC CGCTGGCCTG CGATCCGGCC
GGGCCACTGG TCGCCGAGGT GGTCAAGACC ACCATCGACC GACATGTGGG GCGGGTCTCC
CTGGTCCGGG TCTTCTCCGG CACGCTCCGC CCCGAACAGG TCGTGCACGT CTCCGGGCAT
GGTCTGGCTG ACCGCGGCCA CCCGGACCAC GACGCCGACG AGCGGGTCGC CCACCTCTAC
TCGCCGCTCG GCGCGGCGCT GCGCGAGGTG CGCGCCGGTG TCGCCGGTGA CCTCTGTGCG
CTCACCAAGT CGGGCAGCGC GGAGACCGGC GACACCATCT CGGCCAAGGA CGACCCGCTG
CTGGTCGCGC CCTGGGAGAT GCCGGAGCCG CTCCTGCCGG TGGCGATCGT GGCGCGTACC
CGTGCCGACG AGGACGCACT CGCCCGCAAC CTGGCCCGGC TGGTGGCCGG TGACCCCAGC
CTGCGGCTAC ACCGGGACAG CGAGACCCAT CAGCTGGTGC TCTGGTGCAT GGGTGAGGCG
CATGCCGACG TGGTGCTGGA TCGGTTGCGG AGCGGCGGGG TGGAGCTGGA CACGGCACCG
GTGCGGGTCG CCCTTCGGGA GACGTTCACC GTGCCGGCGA AGGGGCACGG CCGGCACGTC
AAGCAGTCCG GCGGGCACGG CCAGTACGCC GTCTGCGACA TCGAGGTGGA ACCGCTACCC
CGTGGCACCG GCTTCGAGTT CGTCAACCGG GTGGTGGGCG GGGCCGTACC GCACAACTAC
ATCCCATCGG TGGAGAAGGG GGTCCGTGCC CAGCTGGAGC GGGGACTGGC GGCTGGCGCA
CCCCTTGTGG ACCTGCGGGT GACGCTCGTG GACGGAAAGG CCCACAGCGT CGACTCCTCC
GACGCGGCGT TCCAGACCGC CGGTGCGCTG GCGCTCAAGG ACGCGGCCGA CAAGGGCCAG
CCGATACTGC TGGAACCGGT CGACGAGGTG GTTGTCCGGG TGCCCGACGG GTCGGTCGGC
GCGGTGCTGG GCGACCTCTC CGGCCGGCAC GGCCGGGTGC TCGGCACCGA ACCCGACACC
ACCGCCGAAG GGCGAACGCT GGTCCGCGCC GAGGTCGCCG CGACCGAACT CCTCCGCTAC
GCGGTGGAGC TGCGCTCGAT GACCGCCGGT ACGGGCACCT TCCGCCGCGA GTTCGCCCGC
TACGAACCCA TGCCCAGCCA CCGGGCCGAC CGGGTCCGCG CAGAGGACGC CTGA
 
Protein sequence
MAQKSQDKGV AGAVPAVTHP GDIRNVVLVG HSGAGKTTLV EALLAATGTI GRAGNVADGT 
TTCDHDPAAV RQQRSVTLAC APLVHDGIKV NLLDTPGYAD FVGELRAGLR AADAALFVVS
AVDGMDATTA ALWEECAAVN MPRAVAVSRL DHPRADFDEA VALCQRVFGD NVLPLYLPML
GDDGVSTAGL LGLITRRILD YTAGLPAEVR QPDPEHLPAI AESRNELIEG IIAESEDETL
MDRYLEGAEI GTDILVEDLE KAVARGHFYP VVPVCAQTGV GLDALLEVLT AAFPSPLEHD
LPAVTGVDGT PHPPLACDPA GPLVAEVVKT TIDRHVGRVS LVRVFSGTLR PEQVVHVSGH
GLADRGHPDH DADERVAHLY SPLGAALREV RAGVAGDLCA LTKSGSAETG DTISAKDDPL
LVAPWEMPEP LLPVAIVART RADEDALARN LARLVAGDPS LRLHRDSETH QLVLWCMGEA
HADVVLDRLR SGGVELDTAP VRVALRETFT VPAKGHGRHV KQSGGHGQYA VCDIEVEPLP
RGTGFEFVNR VVGGAVPHNY IPSVEKGVRA QLERGLAAGA PLVDLRVTLV DGKAHSVDSS
DAAFQTAGAL ALKDAADKGQ PILLEPVDEV VVRVPDGSVG AVLGDLSGRH GRVLGTEPDT
TAEGRTLVRA EVAATELLRY AVELRSMTAG TGTFRREFAR YEPMPSHRAD RVRAEDA