Gene Strop_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1767 
Symbol 
ID5058226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2022855 
End bp2023838 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID640474038 
Producthypothetical protein 
Protein accessionYP_001158608 
Protein GI145594311 
COG category[L] Replication, recombination and repair 
COG ID[COG3569] Topoisomerase IB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTTGC GGCGTAGTGA TCCGGGTCGG CCCGGCTACC GGCGCCACCG GCGTGGCCGG 
GGCTGGGGGT TCTGCGATCC GGCCGGTGAG CCGGTCCGTG ATTCGGACCG GTTGGCTCGC
CTGCGTGACC TCGTCATCCC GCCGGCCTGG CAGGACGTGT GGATCTCGCC GTACCCGAAC
GGGCATATCC AGGCCACCGG CGTTGACGCT GCTGGCCGCC GACAGTACCT GTACCACCCG
GAGTGGCGGC GAAAGCGGGA TGAGGCGAAG TTCGACCACG TGCTCGAGGT GGCCCGGCGG
TTGCCCCGGT TGCGCGAGCG CGTCGCGGAG GATCTCGACG GTCGGGGACT GAGCCGAGAA
CGGGTGCTGG CCACTGTGGC CCGACTGTTG GACCTGGGCG CCTTTCGAGT AGGCAGCGAG
CGGTACGCGG CCGGTGACGA TCCGACGTTC GGGGTGTCCA CCCTGCGCCC GGAGCACGCC
CACTCCCGCC GTGGTTGCAT GGTCCTCGAG TTTCCGGCGA AGGGTGGTGT CGAACAGATT
CGTTGGATCG AGGATCCGGT GCTGTGTCGG GTGCTGGCCA ACCTGCGGCG TCGTCGTCGT
AGCGCGGCTC GACTCTTTGG CTACTGGGAC GGCCGGCACT GGCGGGACGT GCGCCGAGAC
GATGTCAACG GGTATCTGCG GGTGGCCAGT GGCGGTGAGA TGACCGCGAA GGATTTCCGG
ACCTGGCACG CCACGGTCCT GGCGGCCACC GGGCTGGCCG CTGCCGGCGG ACAGCGTTCG
GCCACCGCCC GCCGCCGTGC GGTGGCCGGG GTCATGCGTG AGGTGGCGGG GTTGCTCGGA
AACACGCCGA CGGTGGCCCG TGCGTCCTAC GTCGACCCCC GGGTCGTGGA CCTCTACCAC
GACGGAGTGC TGGCGCCGGT CGGTCGGTGG ATGCCCCGTG AGGATGCCGA GCGGGGAGTC
CTCGAACTGC TGGCCGAGGC CTGA
 
Protein sequence
MRLRRSDPGR PGYRRHRRGR GWGFCDPAGE PVRDSDRLAR LRDLVIPPAW QDVWISPYPN 
GHIQATGVDA AGRRQYLYHP EWRRKRDEAK FDHVLEVARR LPRLRERVAE DLDGRGLSRE
RVLATVARLL DLGAFRVGSE RYAAGDDPTF GVSTLRPEHA HSRRGCMVLE FPAKGGVEQI
RWIEDPVLCR VLANLRRRRR SAARLFGYWD GRHWRDVRRD DVNGYLRVAS GGEMTAKDFR
TWHATVLAAT GLAAAGGQRS ATARRRAVAG VMREVAGLLG NTPTVARASY VDPRVVDLYH
DGVLAPVGRW MPREDAERGV LELLAEA