Gene Strop_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1763 
Symbol 
ID5058222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2018987 
End bp2019727 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content73% 
IMG OID640474034 
Productphosphoheptose isomerase 
Protein accessionYP_001158604 
Protein GI145594307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG CCCGGTCGCT TCTGGAGGAA CACCTGGCGG GCCTCGCCGC CGCGCTGCCG 
TCGTATCGCC GGGCCGCCCG GCGACTCCCC GCCTGGGGAG CCGAGCTCGC CCGTACCGTC
GCCGGCGGTG GTCGGCTGCT GGTGGCTGGC AACGGCGGTA GCGCCGCCGA GGCGCAACAC
CTCACCGCCG AACTCGTCGG CAAACTCCGT ACCGACCGCC AGCCCTTCTC CGCCATCGCC
CTGCACGCCG AGACCAGCGC CCTTACCGCC ATCGGCAACG ACTACGGCTA CGACCAGGTC
TTCGCCCGTC AGGTCCACGC CCACGGCCGC CCCGGGGACA TCCTCCTGCT GCTGTCCACC
AGTGGCCGGA GCCGGAACCT CCTCCAGGCG GCGCAGGCCG CCCACCAGGT CGGCCTGCGT
TGCTGGGCGC TGACCGGACC CGCCCCCAAT CCGCTGGCCG ACCTCTGCCA CGAGACCCTC
GCCGTCCCCG CGCCGGACGG GCAGATCGTC CAGGAACTGC ACCTGGTCAC CAGTCACCTG
CTCTGCGAGT ACGCCGAGCA GGCGCTGCCG GTGGTCCTGG CCGCCACCGC AGGCACGACG
GACAGGCCGC CGGTGGCAGG GACGCCGTTG ACCGGCCTGG AAGCCGAGGT GCCGTCCGAC
CTTCCAGCCG CCGGGCCGGT ACGGACCGGG GTCGAGGTGG TCCCGGAGGG CGGGCAGCAG
GTCGAGGGAT TGAGGAGGTA A
 
Protein sequence
MTPARSLLEE HLAGLAAALP SYRRAARRLP AWGAELARTV AGGGRLLVAG NGGSAAEAQH 
LTAELVGKLR TDRQPFSAIA LHAETSALTA IGNDYGYDQV FARQVHAHGR PGDILLLLST
SGRSRNLLQA AQAAHQVGLR CWALTGPAPN PLADLCHETL AVPAPDGQIV QELHLVTSHL
LCEYAEQALP VVLAATAGTT DRPPVAGTPL TGLEAEVPSD LPAAGPVRTG VEVVPEGGQQ
VEGLRR