Gene Strop_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1761 
Symbol 
ID5058220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2016808 
End bp2017785 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content71% 
IMG OID640474032 
Producthypothetical protein 
Protein accessionYP_001158602 
Protein GI145594305 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.37552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TGCTCTGGCA TGTGCACGGC TCCTGGACGA CGTCGTTCGT CCACGGTAAG 
CATCGCTACC TGGTGCCCGT CACCCCCGAC CGCGGCCCGG ACGGCCGGGG TCGGGCCCGT
ACCTACCCGT GGCCGGACAA CGCGGTCGAG ATCACCCCGC CGGAACTGGC CACCGCCGAG
GTGGATCTGG TTCTTCTGCA ACGCCCCGAG GAAGAGGCCC TGGCCACGGA GTGGCTGGGC
CGTCGGCCGG GCCGTGACAT CCCGGTGATC TACGTCGAGC ACAACACCCC GAAGGACGGC
GCGGTGCCGA ACAGCCGACA CCCGATGGCC GACCGGGATG ACCTGCTGAT CGCTCATGTG
ACCGCCTTCA ACCAGCTCTA CTGGGACACT GGCGGTACCC GAACCACTGT GGTGGACCAC
GGGGTCGTGC CGCCGACGGT CTCCTACAGC GGCGAGCTGG ACCGGCTCGC GGTGGTCATC
AACGAGCCGA TGCGCCGGTG GCGGGTCACC GGTACGGACC TGCTGCCCCG GTTCGCCGAG
ATCGCGCCGC TGGACGTGTT CGGCCTGAAG GTGACCGGGC TCGCCGACCG GCTTGGGCTG
CCCGCCGACC GCGTGACCAG TCACGACGAC CTACCCCAGG CGCGGATGCA CGCCGAGTTG
GCTCGGCGGC GGGCCTATCT GCACCTGTGC CGCTGGACGT CGCTCGGGCT GAGTCTGATC
GAGGCGATGA CGATCGGTAT GCCGGTCGTC GCGCTCGCCG CCACCGAGGC CGTGATGGCG
GTGCCGCCCG GGGCCGGCGC CCTCGCCACC CGGGTCGATG ACCTGCTCAC CGCCACCGGT
CAGTTGTTGG CGGATCCCGC GGGTGCCCGC CGGGCGGGGG CCGTCGCCCG CCGCGCCGCC
CGCGACCGGT ACGGCCTTGA CCGTTTCCTC ACCGACTGGG ACCGGCTGCT GGAGGAGGAA
GTATGCGGAT CGCGATGA
 
Protein sequence
MNILLWHVHG SWTTSFVHGK HRYLVPVTPD RGPDGRGRAR TYPWPDNAVE ITPPELATAE 
VDLVLLQRPE EEALATEWLG RRPGRDIPVI YVEHNTPKDG AVPNSRHPMA DRDDLLIAHV
TAFNQLYWDT GGTRTTVVDH GVVPPTVSYS GELDRLAVVI NEPMRRWRVT GTDLLPRFAE
IAPLDVFGLK VTGLADRLGL PADRVTSHDD LPQARMHAEL ARRRAYLHLC RWTSLGLSLI
EAMTIGMPVV ALAATEAVMA VPPGAGALAT RVDDLLTATG QLLADPAGAR RAGAVARRAA
RDRYGLDRFL TDWDRLLEEE VCGSR