Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1761 |
Symbol | |
ID | 5058220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2016808 |
End bp | 2017785 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474032 |
Product | hypothetical protein |
Protein accession | YP_001158602 |
Protein GI | 145594305 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.37552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCC TGCTCTGGCA TGTGCACGGC TCCTGGACGA CGTCGTTCGT CCACGGTAAG CATCGCTACC TGGTGCCCGT CACCCCCGAC CGCGGCCCGG ACGGCCGGGG TCGGGCCCGT ACCTACCCGT GGCCGGACAA CGCGGTCGAG ATCACCCCGC CGGAACTGGC CACCGCCGAG GTGGATCTGG TTCTTCTGCA ACGCCCCGAG GAAGAGGCCC TGGCCACGGA GTGGCTGGGC CGTCGGCCGG GCCGTGACAT CCCGGTGATC TACGTCGAGC ACAACACCCC GAAGGACGGC GCGGTGCCGA ACAGCCGACA CCCGATGGCC GACCGGGATG ACCTGCTGAT CGCTCATGTG ACCGCCTTCA ACCAGCTCTA CTGGGACACT GGCGGTACCC GAACCACTGT GGTGGACCAC GGGGTCGTGC CGCCGACGGT CTCCTACAGC GGCGAGCTGG ACCGGCTCGC GGTGGTCATC AACGAGCCGA TGCGCCGGTG GCGGGTCACC GGTACGGACC TGCTGCCCCG GTTCGCCGAG ATCGCGCCGC TGGACGTGTT CGGCCTGAAG GTGACCGGGC TCGCCGACCG GCTTGGGCTG CCCGCCGACC GCGTGACCAG TCACGACGAC CTACCCCAGG CGCGGATGCA CGCCGAGTTG GCTCGGCGGC GGGCCTATCT GCACCTGTGC CGCTGGACGT CGCTCGGGCT GAGTCTGATC GAGGCGATGA CGATCGGTAT GCCGGTCGTC GCGCTCGCCG CCACCGAGGC CGTGATGGCG GTGCCGCCCG GGGCCGGCGC CCTCGCCACC CGGGTCGATG ACCTGCTCAC CGCCACCGGT CAGTTGTTGG CGGATCCCGC GGGTGCCCGC CGGGCGGGGG CCGTCGCCCG CCGCGCCGCC CGCGACCGGT ACGGCCTTGA CCGTTTCCTC ACCGACTGGG ACCGGCTGCT GGAGGAGGAA GTATGCGGAT CGCGATGA
|
Protein sequence | MNILLWHVHG SWTTSFVHGK HRYLVPVTPD RGPDGRGRAR TYPWPDNAVE ITPPELATAE VDLVLLQRPE EEALATEWLG RRPGRDIPVI YVEHNTPKDG AVPNSRHPMA DRDDLLIAHV TAFNQLYWDT GGTRTTVVDH GVVPPTVSYS GELDRLAVVI NEPMRRWRVT GTDLLPRFAE IAPLDVFGLK VTGLADRLGL PADRVTSHDD LPQARMHAEL ARRRAYLHLC RWTSLGLSLI EAMTIGMPVV ALAATEAVMA VPPGAGALAT RVDDLLTATG QLLADPAGAR RAGAVARRAA RDRYGLDRFL TDWDRLLEEE VCGSR
|
| |