Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1740 |
Symbol | |
ID | 5058199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1994853 |
End bp | 1995452 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474011 |
Product | hypothetical protein |
Protein accession | YP_001158581 |
Protein GI | 145594284 |
COG category | [S] Function unknown |
COG ID | [COG3224] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.947815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.634845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGA CGCCCGCGTC GCCAGTGACC GTCTCAGTCG CGCGACGCAC CGACCCCGCT CGGACCCAGG AGATGGTGGC GTGGATGCGC GCTGGCACGG CGCTGGCGGA GGCGTTTCCC GGATTCCTCG GGGCCGGATG GGTCCGCAGC GCTCCCGGGT CCGGCGAGTG GCACATGCTC TACCGGTTCG CCGACGACGA GACGCTGCGT CGCTGGGAGG AGTCACCGCA ACGACACTGG TGGCTGGCCT CGGCGCAGGG CGTCGTCGAG CACACCCAGG TGGAACGCCG CACCGGGGTC GAGGGCTGGT TCTCCCGGCG GGGGCAGGTT ATCGAGCCGG TCAACGCGGA GCCGACCGCT CCACCACCGT CGCCGCCGCG TTGGAAGCAG GCGGTAACGA TCTGGTTGGC GTTCTTCCCC CTCAGCCTGA CCGCGACCCT GCTGACCGGT CAGTTCATCC CCGATGTCCC GGTGCCCGCT CGCGTACTGA TCATGACATT GACGCTGACG CCGCTGATGA CGTACGTGGT GCTGCCCCGG ATCACCCATG CGCTTGGCTG GTGGCTGCAC GGCCGATCTC CCGGCCACAG CACACGATGA
|
Protein sequence | MTMTPASPVT VSVARRTDPA RTQEMVAWMR AGTALAEAFP GFLGAGWVRS APGSGEWHML YRFADDETLR RWEESPQRHW WLASAQGVVE HTQVERRTGV EGWFSRRGQV IEPVNAEPTA PPPSPPRWKQ AVTIWLAFFP LSLTATLLTG QFIPDVPVPA RVLIMTLTLT PLMTYVVLPR ITHALGWWLH GRSPGHSTR
|
| |