Gene Strop_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1740 
Symbol 
ID5058199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1994853 
End bp1995452 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID640474011 
Producthypothetical protein 
Protein accessionYP_001158581 
Protein GI145594284 
COG category[S] Function unknown 
COG ID[COG3224] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.947815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.634845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CGCCCGCGTC GCCAGTGACC GTCTCAGTCG CGCGACGCAC CGACCCCGCT 
CGGACCCAGG AGATGGTGGC GTGGATGCGC GCTGGCACGG CGCTGGCGGA GGCGTTTCCC
GGATTCCTCG GGGCCGGATG GGTCCGCAGC GCTCCCGGGT CCGGCGAGTG GCACATGCTC
TACCGGTTCG CCGACGACGA GACGCTGCGT CGCTGGGAGG AGTCACCGCA ACGACACTGG
TGGCTGGCCT CGGCGCAGGG CGTCGTCGAG CACACCCAGG TGGAACGCCG CACCGGGGTC
GAGGGCTGGT TCTCCCGGCG GGGGCAGGTT ATCGAGCCGG TCAACGCGGA GCCGACCGCT
CCACCACCGT CGCCGCCGCG TTGGAAGCAG GCGGTAACGA TCTGGTTGGC GTTCTTCCCC
CTCAGCCTGA CCGCGACCCT GCTGACCGGT CAGTTCATCC CCGATGTCCC GGTGCCCGCT
CGCGTACTGA TCATGACATT GACGCTGACG CCGCTGATGA CGTACGTGGT GCTGCCCCGG
ATCACCCATG CGCTTGGCTG GTGGCTGCAC GGCCGATCTC CCGGCCACAG CACACGATGA
 
Protein sequence
MTMTPASPVT VSVARRTDPA RTQEMVAWMR AGTALAEAFP GFLGAGWVRS APGSGEWHML 
YRFADDETLR RWEESPQRHW WLASAQGVVE HTQVERRTGV EGWFSRRGQV IEPVNAEPTA
PPPSPPRWKQ AVTIWLAFFP LSLTATLLTG QFIPDVPVPA RVLIMTLTLT PLMTYVVLPR
ITHALGWWLH GRSPGHSTR