| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1728 |
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| Symbol | |
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| ID | 5058187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1981098 |
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| End bp | 1981982 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640474000 |
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| Product | regulatory protein, LysR |
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| Protein accession | YP_001158570 |
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| Protein GI | 145594273 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0729139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.555959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTCCA GCCTGACAGC CGAGGACCTG GTGCTGGTCG AGGCCGTGTC CCGGCACGGG
TCGGTCGGGG CCGCGGCCAA GGAACTCCTT ACCACCCAGC CCTCGGCCTC GCGCCGGCTG
GCCGCGCTGG AACGCCGCCT GGGGACCAGG TTGTTCGAGC GGGACACGAC CGGGGCCCGC
CCTACCCCAG CCGGGCGGGA GCTGGCCCGG CAGGCCGCAC GCCTGCTGGC CGACCTCGAC
GCCCTCCCAG CCCAGATCGC CGCCGCGACG CAGGCCCCGT CGGTGAGCCT GGGCACGATC
CAGGCGCTGG CGCCGATCGT GTTCACCGCC GCCCAGATCG AACTCGCAGG CGTGACGCTC
CAGACCGAAA TCGATCACGG CCCCACCCTG ATCGGCCGGG TCCACCAGGG CCTGCTGGAC
GCGGCGATCG TCACGATCGC AGACCAGGCT GTCCTGCCCC AAGGCCTCCA GACCACCGGG
CTCGGGGCCT CCCCGCTGGT CCTGGTCCTG CCCGCAGACA CCACACCCCT GGCCGCCGGG
AGGAAGGCAT TGGCGGGAAG GGAAGTGCTG TACTCCTCGA TTGACCTCAC TGGCAAGCAC
CTGCACGCAG GCTTGTCCGG GCTCGGCGCG CTACCGCAGC CGGGCCCCAC GATCGAGGCC
ACCCTGCGCA TCGCCCGGCA CCGCAAGGTC CCGGCCGTGG TTCCCGACCT CGCGGCCCGC
TGGTGGGACG ACCCCACCGA CCGGCTGCTG CCCTCCCCAG TGCCCGGAAA GGTCAAGCTC
TCGCTGGTGA CCAGGCCCCC GCAGCCATCC CGCCTGGCAC AGGTACTGCC GGCCCTGACC
GCGCGGATCC TGGGCGCGCC GCAGGACTCA CCGGACAGGC CCTAG
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| Protein sequence | MRSSLTAEDL VLVEAVSRHG SVGAAAKELL TTQPSASRRL AALERRLGTR LFERDTTGAR
PTPAGRELAR QAARLLADLD ALPAQIAAAT QAPSVSLGTI QALAPIVFTA AQIELAGVTL
QTEIDHGPTL IGRVHQGLLD AAIVTIADQA VLPQGLQTTG LGASPLVLVL PADTTPLAAG
RKALAGREVL YSSIDLTGKH LHAGLSGLGA LPQPGPTIEA TLRIARHRKV PAVVPDLAAR
WWDDPTDRLL PSPVPGKVKL SLVTRPPQPS RLAQVLPALT ARILGAPQDS PDRP
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