Gene Strop_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1727 
Symbol 
ID5058186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1980587 
End bp1981084 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID640473999 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_001158569 
Protein GI145594272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.129444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.522708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTAC ACGACTCTGG ATTTCGGCTG CCACGGGAAC GGCTCGAGGA GCGCATTCGG 
AACCTGCTCT CGTCGCAGAA CATGTGTGTG CTGGCCACGG TCGGGCCCGA CGGACCGCTC
GCCACCCCGG TGCGCTACTA CCCGCTCGAC TTCGCGGTGA TGTTCACCGC CGCGCCGCGG
TCGCCGAAGC TGCGCAACAT CGCCGCGGAC CCACGGGTCT CGGTGGGAAT CTTCGCCCCG
CTGGTCGGGC TGGCCAGCAG TCGCGGCGCG CAGCTCTTCG GCGAGGCTCG GGTGCTGCCA
CCCGAGCACC CCGACCGCGA GCCCTACTGG GCCGCGTTTC GGTGGGAGAA CGAGCACGCC
GAACGGGGCC GGTCGCTCGC CGAACCACCA CGGGACACCC TGGTGGTGAT CGAGGCGAAC
CGGATCGTCT ACACCGAGCA CTGGCTCCGC CGGGAGGGTT TCGCCGCCCG TCAGTTCTGG
AAACGCCGCG GCAACTGA
 
Protein sequence
MPLHDSGFRL PRERLEERIR NLLSSQNMCV LATVGPDGPL ATPVRYYPLD FAVMFTAAPR 
SPKLRNIAAD PRVSVGIFAP LVGLASSRGA QLFGEARVLP PEHPDREPYW AAFRWENEHA
ERGRSLAEPP RDTLVVIEAN RIVYTEHWLR REGFAARQFW KRRGN