Gene Strop_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1721 
Symbol 
ID5058180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1974085 
End bp1974639 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID640473993 
Productdehydratase 
Protein accessionYP_001158563 
Protein GI145594266 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.775583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.261141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCTG AGCAGGCCGG AGAGCCGACC GGGCCCGGTC CGGTCGGTTA CCGGATGGTA 
GGGGAGAACC GGTACCGCGA GCAGGTCGGC TTCTACTACG ACGAGATCGT CGTCGGCACG
GTGATCGAGC ATCGGCCCGG CCGCACCGTG ACCGAGATGG ACAACGTCCT GATGAGCATG
TTGAGCATGA ACGCGTCACC GCTACACATC GACTGCGCGT ACGCCGAGGC GGGCCGCTGG
GGTCAGCCCC TCGTCTCCAG TCTGGTGACC CTGAGCATCG TCGGCGGGAT GGCCGCCCGC
AGCACCAGCG GCCGGGCCAT CGCGAACCTC GGCTGGGAAC GGATCCACCT TCCCCAGCCG
GTCTTCGTGG GCGACACGCT GTACGCCGAG AGCGAGGTGA CCGCCAAACG GCTCTCCGCC
AGCCGACCGG GCGAGGGCAT CGTGAGCTGC CGCACCATCG GCCGCAAAGC CACCGGCGAG
GTGGTCCTCA CCTTCGAGCG GAGCTTCCTG GTGCCGACTT GGGAGTCCAG CGTCGACGAT
ACGACAGGCT ATTGA
 
Protein sequence
MWAEQAGEPT GPGPVGYRMV GENRYREQVG FYYDEIVVGT VIEHRPGRTV TEMDNVLMSM 
LSMNASPLHI DCAYAEAGRW GQPLVSSLVT LSIVGGMAAR STSGRAIANL GWERIHLPQP
VFVGDTLYAE SEVTAKRLSA SRPGEGIVSC RTIGRKATGE VVLTFERSFL VPTWESSVDD
TTGY