| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1712 |
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| Symbol | |
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| ID | 5058171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1961502 |
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| End bp | 1965521 |
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| Gene Length | 4020 bp |
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| Protein Length | 1339 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473984 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001158554 |
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| Protein GI | 145594257 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACG AAGTCGCCTC CACCCCGCCC GACGCCACCC GCGAGCTGCA CCGCCGGCTA
CGCCCGTTGA TGCTCCGTGA CCAGCACCGT CTTCGACGGC GGCTGGACGG CGCACGCCGG
ATACCCGACC CGCAACGTCG GGAAACAGCC CTGGCCGAAA TCACGACGGA TGTGGTCCGG
GCCGAGGCAC GGCTGGCGGT CCGGCAGGCC GCCGTACCCG CGATCACCTA CCCGGCCATG
CTGCCGGTCA GCGACCGCCG GGACGAGATC GCCGCGGCGA TCCGTGACCA CCAGGTCGTG
ATCGTCGCTG GCGAGACCGG CTCCGGCAAG ACCACCCAGC TGCCCAAGAT CTGCCTGGAG
CTGGGCCGCG GCGTCCACGG GTTGATCGGG CACACCCAGC CGCGCCGGCT CGCCGCCCGA
ACAGTCGCCG ACCGAATCGC CGAAGAACTC GGCACCGAAC TGGGCGAGGT GGTCGGCTAC
CAGGTGCGCT TCGCCGACCA GGTCAGCGAC CGGAGCCTGG TCAAGTTGAT GACCGACGGC
ATCCTGCTCG CCGAGTTACA GCACGACCGG ATGCTGCGCC AGTACGACAC GATCATCGTT
GACGAGGCGC ACGAGCGAAG CCTCAACATC GACTTCATCC TCGGCTACCT ACGGCAGCTC
CTCCCCCGCC GGCGGGACCT CAAGGTGATC ATCACCTCGG CCACCATCGA GACCGACCGG
TTCGCGCGAC ACTTCGCCGA CGCCGACGGC AACCCGGCGC CGGTCGTCGA GGTATCCGGC
CGGACCTACC CGGTCGAGGT ACGGTACCGG CCGCTGGTCG AGGTGGGCGA GGACGAGGAC
GACACCGACG AGGAGCAGGT TCGCGACCAG GTCCAGGCCA TCGGGGACGC GGTGCAGGAA
CTGGCCACCG AAGGCCCCGG CGACATCTTG GTCTTCCTCT CCGGTGAACG GGAGATCCGA
GACACCGCCG ACGCGCTCGG CAAGCTCGTC GCGCACCGAC CGACGCTGCG CAACACCGAG
ATCCTGCCGC TGTACGCCCG CCTGAGCACC GCCGAGCAGC ACCGCGTCTT CGCCCCGCAC
ACCGGTCGGC GGGTGGTGCT GGCCACCAAC GTCGCGGAGA CATCGCTCAC CGTGCCCGGC
ATCCGATACG TGGTGGACCC CGGCACGGCG CGCATCTCCC GCTACTCGAA CCGGCTCAAG
GTGCAACGGC TGCCCATCGA GCCGGTCTCG CAGGCCTCGG CCAACCAGCG CACGGGACGA
TGTGGGCGCA CCTCGGACGG CATCTGCATC CGCCTCTACG ACGAGCCGGA CTTCCAGTCC
CGGCCCGAGT TCACCGACCC GGAGATCCTG CGCACCAACC TCGCGTCGGT CATCCTCCAG
ATGACCGCGA TCGGACTCGG CGATATCGCC GCGTTCCCCT TCATCGACCC ACCGGACCGT
CGCACCATCA CCGACGGCGT CAACCTGCTG CACGAGCTGG GCGCGCTGAA CCCAACCGAG
ACCGACCCGG CGAAACGGCT CACCCCGCTC GGACGACGGC TCGCCCAGCT GCCGGTCGAC
CCCCGGCTGG CCCGGATGGT GCTCGAGGGT GAACGCAACG GCTGCGCCAC CGAGGTGGTC
GTGATCGCGG CGGCGCTGTC GATCCAGGAC CCCCGCGAAC GGCCGGTCGA CAAGCAGGCC
CAGGCCGACC AGGCGCATGC GCGCTTCGCC GACCAGGAGT CGGACTTCGT GGCGTACCTG
AACCTGTGGC GCCACCTGCG CGAGCAGCAG CGGGCCCGGT CGTCCAGTGG ATTCCGGCGG
ATGTGCCGAT CGGAGTACCT GAACTACCTG CGGGTGCGGG AGTGGCAGGA CATCGTGAGC
CAGCTCCGGC AGGCGCTGCG GACCCCGGAG CGGAGCCGGC GGCGGGGCGG GCCGGCCACC
GACGGCGGTG AGCGACGCGG CGGCGGGGCG GACCTGCCGG AGGAGATCGA TACCCCGAAG
GTGCACCAGT CCCTGCTGGC CGGCCTCCTC TCCCACGTCG GCCTGAAGGA CACCCAGCGG
CACGAATACC TGGGCGCGCG GGGGGCGAAG TTCGCCCTCT TCCCCGGCTC CGCCCTGGCA
AAAAAGCCAC CGCGCTGGGT GATGGCTGCC GAGTTGGTGG AGACCACTCG GCTGTGGGGC
CGGGTGAACG GTCGGGTCGA GCCGGAGTGG GTCGAGCCCC TCGCCCAGCA CCTGGTGAAA
CGCAGCTACA GCGAGCCGCA CTGGGAGAAG CGGCAGGCGG CGGTCATGGC CGTCGAGAAG
GTGACGCTGT ACGGCGTCCC GATCGTCAGC TCCCGCAAGG TCAATTTCGG CCGGATCGAT
CCGGTGGTCA GCCGTGAGCT GTTCATCCGA CATGCGCTGG TCGAGGGGGA CTGGCAGACC
CACCACCAGT TCTGGCGGGA CAACCAGCAG CTACTCGACG AGGTGACCGA GTTGGAGAAC
CGGGTCCGAC GGCGGGACAT CCTGGTCGAC GACGAGACGA TCTTCCAGTT CTACGACGAA
CGAGTCCCGG CCGAGGTGGT CTCCGGTCGG CACTTCGACG CCTGGTGGAA GCGGGAGCGC
CGGCAGCGAC CGGACCTGCT GACCTTCACC CGGGACCTGC TGGTCAACGC CGGTCGCGGA
GGCGTGGACG AGGTCGGCTA CCCCGACGAG TGGCGAGCCG ACGGGGTGCG CCTGCCGCTG
ACGTACCGCT TCGACCCCGG CACGCCCGCC GACGGTGTCA CGGTGGACAT CCCGCTGCCG
CTGCTCAACC AGGTGCCGGC GGAGAGCTTC CAGTGGCAGG TGCCGGGACT CCGCGAGGAG
TTGGTCATCG CGCTGATCCG CTCGCTGCCC AAGGCGGTCC GACGAAACTT CGTCCCGGTG
CCCGACTACG CCCGGGCCGT ACTCGCCGAG CTACCCCCCG GCGAGGAGGA CCTGCTGGAC
GCCCTCACCC GGCAGCTACG CCGGATGACC GGCGTCACCG TCCCCCGGGA CGCCTGGGAT
CTTGGCAAGC TACCGCCGCA CCTGCGGGTC ACCTTCCGGG TACTCGGCGA GGACGACCGC
CCGGTCGCCG AGAGCAAGGA CCTGCCGGCG CTACAACGCG AGCTCACCGC GGAGGTACGT
CAGGTGGTGG CCGCCGCCGC GCCGGACGTG ACCCGCAGCG GGCTGACCGA CTGGGAGATC
GGTGCCCTGC CCCGCACGGT CGAGCAGGTC CGGGCCGGGT ACGCGGTCAC CGCCTACCCG
GCGCTGGTGG ACGAGGGCGC CACGGTCGGG GTACGGGTCT TCGACTCCCC CGCCGAGCAG
GAAGCCGCGC ACTGGGCAGG GACCCGACGC CTGCTCCGGT TGACCGCGCC GTCCCCGGCG
AAGTTTCTCC AGGGGCGGCT CTCCAACGAG GCGAAGCTGG CGCTCAGCCG CAATCCGCAC
GGGGGCGTAC CGGCACTGAT CGAGGACGCG GCCGGCGCGG CGCTCGACAA GCTGATCGCC
GACGCCGGAG GCCCGGCCTG GGACGCCGAT GGTTATGCCG CGCTGCGCAG TACGGTCCGC
ACCGGCCTGG TGGAGACCGT CGTCGAGGTG ATGGAGCGGG TCCGCGGGGT ACTCGCCGCC
GGGTACGCGA TCGAGCAACG CCTCGGCGCG ACCCGCAACC TGGCGGTGGT GGCCGCACTC
GCCGATGTCC GCAGCCAGCT CACCGGCCTG ATCCACCCGG GCTTCATCAC CGAGGCCGGC
TACCCACGCC TACCCGATCT ACGGCGCTAC CTGACCGCGA TCGAACGTCG GTTGGACCGG
CTACCCGGCA ACCCGGCCCG GGACAAGCAG CAGCAGGACC GGATCGCCGT CGTGCAGCGG
GAGTACGCGG ACCTCCTCGC CGCCCTGCCG CCGGCGAAGC GGCGGACGGT GGCCGTCCGC
CAGATCCGGT GGATGATCGA GGAGCTGCGG GTGAACGTCT TCGCCCAGGC GCTGGGCACC
CCGTACCCGG TCAGCGAGCA ACGCATCTAC CGCGCAATGG ACAACGCCGA GGCCCACTGA
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| Protein sequence | MQNEVASTPP DATRELHRRL RPLMLRDQHR LRRRLDGARR IPDPQRRETA LAEITTDVVR
AEARLAVRQA AVPAITYPAM LPVSDRRDEI AAAIRDHQVV IVAGETGSGK TTQLPKICLE
LGRGVHGLIG HTQPRRLAAR TVADRIAEEL GTELGEVVGY QVRFADQVSD RSLVKLMTDG
ILLAELQHDR MLRQYDTIIV DEAHERSLNI DFILGYLRQL LPRRRDLKVI ITSATIETDR
FARHFADADG NPAPVVEVSG RTYPVEVRYR PLVEVGEDED DTDEEQVRDQ VQAIGDAVQE
LATEGPGDIL VFLSGEREIR DTADALGKLV AHRPTLRNTE ILPLYARLST AEQHRVFAPH
TGRRVVLATN VAETSLTVPG IRYVVDPGTA RISRYSNRLK VQRLPIEPVS QASANQRTGR
CGRTSDGICI RLYDEPDFQS RPEFTDPEIL RTNLASVILQ MTAIGLGDIA AFPFIDPPDR
RTITDGVNLL HELGALNPTE TDPAKRLTPL GRRLAQLPVD PRLARMVLEG ERNGCATEVV
VIAAALSIQD PRERPVDKQA QADQAHARFA DQESDFVAYL NLWRHLREQQ RARSSSGFRR
MCRSEYLNYL RVREWQDIVS QLRQALRTPE RSRRRGGPAT DGGERRGGGA DLPEEIDTPK
VHQSLLAGLL SHVGLKDTQR HEYLGARGAK FALFPGSALA KKPPRWVMAA ELVETTRLWG
RVNGRVEPEW VEPLAQHLVK RSYSEPHWEK RQAAVMAVEK VTLYGVPIVS SRKVNFGRID
PVVSRELFIR HALVEGDWQT HHQFWRDNQQ LLDEVTELEN RVRRRDILVD DETIFQFYDE
RVPAEVVSGR HFDAWWKRER RQRPDLLTFT RDLLVNAGRG GVDEVGYPDE WRADGVRLPL
TYRFDPGTPA DGVTVDIPLP LLNQVPAESF QWQVPGLREE LVIALIRSLP KAVRRNFVPV
PDYARAVLAE LPPGEEDLLD ALTRQLRRMT GVTVPRDAWD LGKLPPHLRV TFRVLGEDDR
PVAESKDLPA LQRELTAEVR QVVAAAAPDV TRSGLTDWEI GALPRTVEQV RAGYAVTAYP
ALVDEGATVG VRVFDSPAEQ EAAHWAGTRR LLRLTAPSPA KFLQGRLSNE AKLALSRNPH
GGVPALIEDA AGAALDKLIA DAGGPAWDAD GYAALRSTVR TGLVETVVEV MERVRGVLAA
GYAIEQRLGA TRNLAVVAAL ADVRSQLTGL IHPGFITEAG YPRLPDLRRY LTAIERRLDR
LPGNPARDKQ QQDRIAVVQR EYADLLAALP PAKRRTVAVR QIRWMIEELR VNVFAQALGT
PYPVSEQRIY RAMDNAEAH
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