Gene Strop_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1702 
Symbol 
ID5058161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1947531 
End bp1948460 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID640473974 
ProductNAD(+) kinase 
Protein accessionYP_001158544 
Protein GI145594247 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.254553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.755858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGA TCCGGCTCGG GCTGGTGCTG CACCCGACCC GGGACGTATC CGAGGTGGTC 
GACCTCATCG TCGATTGGGC GAGGAGGCAC CGGATGATGC TGGTGGTGCG GGGGCCGGAC
CGGCATCGGG TACCGACCTC GGTGGAACCG CTTCCCGCCG AGCAGGTGGC CGCGGCCAGT
GACGCGCTGA TCAGCATCGG CGGTGACGGC ACCATGCTCG GCGCGTTGCG CTCGGCGGTC
CGCGACCCGA AACCGGTGCT CGGGGTGCAC CTGGGCCAGC TCGGCTTCCT GGTCGAGGTC
GAGCCGCCGG ACCTGCCGAC CGCGTTGGCC CGGCTGGCCA GCCGGGACTT CACCGTGGAG
CGACACAGCT GCCTGGCCTG CGACGTCTGC GGTGACGACG TGGTCGCGTT CAATGACGTC
GCGCTGGTAC GCCAGCCCGG CGCGGGCTTC GTCACCGCCA CCCTCGCGGT GGACGGGCAG
CGGTACGGCT ACTACCGGTG CGACGCGCTG GTGGTGAGTA CGCCGACCGG GTCAACGGCG
TACGGCTACG CCGCCGGCGG GCCGCTGGTG TCCCCGGCAA GCGACGTGGT GGTGGTGACG
CCGTCCGCAC CGATGGCGGG GATCTCCCGC TCGGTGGTCC TCTCCCCCGA CGAACGGATC
CGGCTGGAGC TTGCCCCTGG CTCCGCGCCG ATGGCGGTGG AGATGGACGG GCAGGTGATC
CAGGACGCGG CGACCGAGGG CACGGTGGAC GTGACCTACC GCCGCGACGC CGGCCTGGTG
GTCCGCCTCG ACCCACGCCG CTACCAGCAG CGCAACCAGC TCAAGCTGAG CCTGCTGGAC
CTGCCACTGC TGCCCGAGCA GCTCCGCGAA CTCCTTCCCG AAGGCCTCCG CGAGGAACTG
AGCCGGCGGG GACTCCCCCC GCACCGTTGA
 
Protein sequence
MDQIRLGLVL HPTRDVSEVV DLIVDWARRH RMMLVVRGPD RHRVPTSVEP LPAEQVAAAS 
DALISIGGDG TMLGALRSAV RDPKPVLGVH LGQLGFLVEV EPPDLPTALA RLASRDFTVE
RHSCLACDVC GDDVVAFNDV ALVRQPGAGF VTATLAVDGQ RYGYYRCDAL VVSTPTGSTA
YGYAAGGPLV SPASDVVVVT PSAPMAGISR SVVLSPDERI RLELAPGSAP MAVEMDGQVI
QDAATEGTVD VTYRRDAGLV VRLDPRRYQQ RNQLKLSLLD LPLLPEQLRE LLPEGLREEL
SRRGLPPHR