Gene Strop_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1701 
Symbol 
ID5058160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1945775 
End bp1947424 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content71% 
IMG OID640473973 
Productphosphoglucomutase 
Protein accessionYP_001158543 
Protein GI145594246 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.231771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.914305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCA CGCACCCCCG CGCGGGACAG CCCGCCCAGC CATCCGACCT GGTGGACGTG 
GCGATGCTGG TAACCGCGTA CTACGCGGAG CACCCCGACC CGGCGGACCC GGGGCAGCAG
GTCTCCTTCG GCACCTCCGG GCACCGGGGA TCCCCGCTGC GAAACACGTT CAACTCCGAC
CACATCGTCG CGGTCACCCA GGCGCTCTGT GACTACCGGC GGGAGTGCGG TGTGAACGGC
CCGCTCTTCC TCGGCCGGGA CACCCACGCG CTCTCCGCCC CGGCGGCGGT GGACGCGCTG
GAGGTGCTCG CCGCCAACGA GGTCCCGGTC CTGTTGGACA ACCGGGACGG GTACGTTCCG
ACACCGGCCG TCTCCCACGC CATCCTGGAC CACAACCAGG GGCGGAGCAG CGGTCTCGCC
GACGGCATCG TGATCACTCC GTCGCACAAC CCACCAGAGG ACGGCGGGTT CAAGTACAAC
CCGACCCACG GTGGCCCGGC GGACACCGAT GTCACGACGT GGATTCAGGA GCGTGCGAAC
GCGCTCCTCG CCGCCGGGCT CAAAGAAGTG CGCCGCATCC CGTACGCACG GGCGCGTACC
GCCGAGACCA CCGGCCGGTA CGACTTTCTC GGCCGCTACG TGACCGACCT GCCGTCCGTG
CTCGACCTCG ACGCGGTCCG GGCAGTTGGC GTCCGGATCG GGGCTGACCC GCTCGGCGGG
GCGAGTGTCG CCTACTGGGG CGAGATCGCT GACCAGCATC GGCTGGACCT CACCGTGGTG
AACCCGACTG TCGATCCGAC GTGGCGCTTC ATGACCCTGG ACGGGGACGG CCGGATCCGA
ATGGACTGCT CGTCCCCGAA CGCGATGGCA TCGTTGATCG CCGCTCGGGA CCGGTTCGCG
GTCTCCACCG GTAACGACGC CGACGCGGAC CGGCACGGCA TCGTTACCCC GGACGGCGGT
CTGCTGAACC CGAACCACTA CCTGACGGTG GCCATCGCCC ACCTGTTCCG TACCCGGACG
CGCTGGGGGC CGGACGCCGC CGTCGGCAAG ACCCTGGTCT CCTCGTCCAT GATCGACCGG
GTGGCCGCCG ACCTGGGGCG CCCGCTCCTG GAGGTGCCGG TCGGCTTCAA GTGGTTCGTG
CCGGGCCTGC TCGAGGGCGC GGTCGGCTTC GGTGGCGAGG AGAGCGCCGG CGCCTCCTTC
CTGCGGCGGG ACGGCAGCAC CTGGACCACC GACAAGGACG GCATCCTGCT CTGCCTGCTG
GCGTCCGAGA TCATCGCCAT CACCGGCCGC ACCCCGAGCG AGCACTGGAC GGAGCTGGCT
GAGCGGTTCG GGGCACCCGA GTACGCCCGG ATCGACGCCC CTGCGAGCCG GGCGGAGAAG
GCGGTGCTCG GTCGGCTCTC GCCGGAACAG GTGACGGCTA CCGAGCTGGC CGGTGAACCG
ATCACGGCCA CGCTCACCCG CGCCCCGGGT AACGGGGCCC CGATCGGTGG CCTGAAGGTC
ACCACCGAGA GCGGCTGGTT CGCCGCCCGC CCATCCGGCA CCGAGGATGT CTACAAGATC
TACGCCGAGT CGTTCCAGGG GCCCGAGCAC CTGGCTCGAA TCCAGGCGGA GGCGAAGGAG
TTGGTCTCGT CGGTGCTGGC GGCGGCCTGA
 
Protein sequence
MVSTHPRAGQ PAQPSDLVDV AMLVTAYYAE HPDPADPGQQ VSFGTSGHRG SPLRNTFNSD 
HIVAVTQALC DYRRECGVNG PLFLGRDTHA LSAPAAVDAL EVLAANEVPV LLDNRDGYVP
TPAVSHAILD HNQGRSSGLA DGIVITPSHN PPEDGGFKYN PTHGGPADTD VTTWIQERAN
ALLAAGLKEV RRIPYARART AETTGRYDFL GRYVTDLPSV LDLDAVRAVG VRIGADPLGG
ASVAYWGEIA DQHRLDLTVV NPTVDPTWRF MTLDGDGRIR MDCSSPNAMA SLIAARDRFA
VSTGNDADAD RHGIVTPDGG LLNPNHYLTV AIAHLFRTRT RWGPDAAVGK TLVSSSMIDR
VAADLGRPLL EVPVGFKWFV PGLLEGAVGF GGEESAGASF LRRDGSTWTT DKDGILLCLL
ASEIIAITGR TPSEHWTELA ERFGAPEYAR IDAPASRAEK AVLGRLSPEQ VTATELAGEP
ITATLTRAPG NGAPIGGLKV TTESGWFAAR PSGTEDVYKI YAESFQGPEH LARIQAEAKE
LVSSVLAAA