Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1690 |
Symbol | |
ID | 5058149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1932019 |
End bp | 1933572 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640473962 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001158532 |
Protein GI | 145594235 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.539973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.752628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGA CGGAGGGCAC ATCGAAGGCG CCTGCCCGGA TCTTGATGCT TGTTGACAAC GGCGTCACCG GTGACTCCCG AGTGCAGAAG ACCGCACGTT CAGCCGCTGA CGCCGGGTGG GATGTGACCC TGCTCGGACG TACCGGCAAC GGGCAGCAAC AGTGGCAGCT CGGTGGCGCA ACGGTGCAGC TGGTGCCGAT GCCAAGCCCG TTGCGGCACC GCAGGCACGA GCTACGTCGG CGTTGGTTGA TCGCGCCGTT GGCGTATCCG CGGACCGGTA TAGCCGCTCG GCGGCAGCAG GAGGTTCGCG CCTGGCAGGC CGATCTGCGG GTGGATCGGG CGTTGGCGGC CACCGAGGGC AGGTCCCCCC TGGCTCTGCA GTGGCTGCGG GTGCAGACGC TGGCGGCTCG GGTAACCCGA AAGTGGATTT CGTTCCGGCA CTGGCAGTTG ACCTTTGGCC AGCAGAGGCG CAAGCGGTTG ACGACCCCGT CGGACCGCCT CTTCACCTGG TTGCAGCTGC GTCTGCGGGG TGACCGTGCC TGGCGCAAGC TCGAACCACA GCTATGGGAT TTTGAGCTCG CCTACGCGAA GACCGTCGAC GAGCTCGAAC CGGACATCAT TTACGCCAAC GACTTCCGAA TGCTCGGTGT TGGTGCCCGC GCCAAGATTC GAGCAGCGGC GGCTGGCCGT GAGATCAAGC TGATCTGGGA TGTCCATGAG TACCTGCCTG GCCTCAAGCC GAGGGCCGAC AACGCCCGGT GGATGATTTC CCATCGGGCG CACGAGCGTG AGTACGCCAA GTGGGCCGAT GCGGTGATCA CGGTTTCCGG GCGACTGGCG GAGATGTTGC AGCGTGATCA TAACTTCGCT GAGCGGCCGT CCGTCGTGCT GAACGCGCCG AACTCGGACG ACGCGATGGG CGGTCAGCGC GCTGATGCGC TGGATGTGCG CAGCCAATGT GGGCTCGATG CAGATGTCCC GCTGGTGGTC TACAGCGGCG CGGCGGCAGC GCACCGTGGT TTGGGCGTGA TGATGGAAGC GTTGCCACGG CTACCCGACG TACATGTGGC ATTCGTCGTC AACGCCCCCA CCGGGCCCTA CCTGACCGGT CTGGTTGCCC GGGCTCGTGA ACTCGGCGTG GCGGACCGCG TGCACGTGTT GCCGTACGTC GCCCCGGCCG AGGTGGTCAG CTTCCTGTCG ACCGCGACGT TGGGCGTGAT CCCGATTCAC CATTGGCTCA ACCACGAGAT CGCCCTGGTC ACCAAGTTTT TCGAGTACTC GCATGCACGA CTGCCGATCG TGGTTAGCGA TGTCGAGACC ATGGCGGCTG TTGTGCAGGA AACCGGGCAG GGTGAAGTGT TCCCGGCCGA AGACGTCGAT GGGTATGTCG CGGCGGTGGA GGCGGTCCTG TCGGACCCGG ATCGGTATCG CAAGGCGTAC GACTCGATGG ATCTGAAGAC GTGGACCTGG GAGGAGCAGG CGAAGGTCCT GAACAATGTC TATCGGCGGC TCATTTCGCA GGACCGTCAC CCGGTCGCGT CGGCCTCCGA TTGA
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Protein sequence | MTATEGTSKA PARILMLVDN GVTGDSRVQK TARSAADAGW DVTLLGRTGN GQQQWQLGGA TVQLVPMPSP LRHRRHELRR RWLIAPLAYP RTGIAARRQQ EVRAWQADLR VDRALAATEG RSPLALQWLR VQTLAARVTR KWISFRHWQL TFGQQRRKRL TTPSDRLFTW LQLRLRGDRA WRKLEPQLWD FELAYAKTVD ELEPDIIYAN DFRMLGVGAR AKIRAAAAGR EIKLIWDVHE YLPGLKPRAD NARWMISHRA HEREYAKWAD AVITVSGRLA EMLQRDHNFA ERPSVVLNAP NSDDAMGGQR ADALDVRSQC GLDADVPLVV YSGAAAAHRG LGVMMEALPR LPDVHVAFVV NAPTGPYLTG LVARARELGV ADRVHVLPYV APAEVVSFLS TATLGVIPIH HWLNHEIALV TKFFEYSHAR LPIVVSDVET MAAVVQETGQ GEVFPAEDVD GYVAAVEAVL SDPDRYRKAY DSMDLKTWTW EEQAKVLNNV YRRLISQDRH PVASASD
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