Gene Strop_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1687 
Symbol 
ID5058146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1928460 
End bp1929260 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID640473959 
Productregulatory protein, TetR 
Protein accessionYP_001158529 
Protein GI145594232 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTGGG GAACATCCAG CCCTTGGCGT TGCGCCGCAC GGGCGTCAGA CTCCGTGGCT 
GGCACGGAAG GTAGTCGAAA GCGCGTCGGG ACGCAACCGT ACCGTCGTTG CGGTACATTG
TCGCACGTGA CGACCGAGAA GAGGCGTGCT CCGGCGGGTG CGGCGGTGCT GCGTGGTGAG
ATCACCACGG CAATCCGCCG TGCCGTCCTG CAGGAACTGG CCGCGGTCGG GTATGGCCGT
CTCTCTATTG AAGCGATCGC GCGGCGTGCT GGGGTCGGCA AGACCGCGAT CTACCGGCGG
TGGAGCTCGA AGGTCGACCT CGTGCTCGAG GTGGTGGTGG CGGCGGTGGG GAAGCGGTTC
CCCCTCCCGG ACACCGGTGG CCTTCGCGGT GACCTGGAGT TAGTGTTCTT GATCATGACT
CGGGCGCTCG GGCATCCGCT GGCGGCCCAG ATCATCCCCG ACCTGCTCGC CGAGGCTGCC
CGGAATGAGC AGATCGCGCA GACCCTGCAA CGGGTGCTGC GCGACAACCA GCGTGATATC
GGCGGTCAGG TGGTTGGCCG GGCGGTTTCC CGGGGTGAGC TGCCACCCGA CATCGATCTC
GATATCGCCG TCGACCTGAT CGTCGGCCCG CTGTACTGGC GGCTCGCGGT GTCTCGGACG
CCGCTCGCCG TCGAAGAGCT GCCGGGTCTG GCCGCGGCTG TCGCCGCGGC CCTCGGGGTA
GCATCCCAAC CGGCCGTTCC CAGTGAACTG GGCGTGCCGC TACCTGGCAC GGTAACCAGA
ACCGATACCG GTCAGTCATG A
 
Protein sequence
MAWGTSSPWR CAARASDSVA GTEGSRKRVG TQPYRRCGTL SHVTTEKRRA PAGAAVLRGE 
ITTAIRRAVL QELAAVGYGR LSIEAIARRA GVGKTAIYRR WSSKVDLVLE VVVAAVGKRF
PLPDTGGLRG DLELVFLIMT RALGHPLAAQ IIPDLLAEAA RNEQIAQTLQ RVLRDNQRDI
GGQVVGRAVS RGELPPDIDL DIAVDLIVGP LYWRLAVSRT PLAVEELPGL AAAVAAALGV
ASQPAVPSEL GVPLPGTVTR TDTGQS