Gene Strop_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1674 
Symbol 
ID5058133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1910629 
End bp1911336 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content72% 
IMG OID640473946 
Productcation efflux protein 
Protein accessionYP_001158516 
Protein GI145594219 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.968978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCT CCGCACTGAC CCCCCAGCGG CGTGCGCTCC TGTCCCGACG CAGCCTCTGG 
CTGGCCTACG CCACCGCCGG ATACAACCTC CTGGAGGGCT TGGTCGCGAT CGCCGCCGGC
TCGGCAGCCT CCTCCACCGC GCTGATTGGC TTCGGCCTCG ACTCGTTCGT CGAGGTCTCC
AGCGCGGCCG TGGTGATCTG GCAGTTCCGC TCCCGGATGC CAGAGGAGCG GGAACGGTTG
GCGCTGCGAC TGATCGGTGT CTCCTTCTTC GCCCTGGCCG CCTGGGTCAC CGTGGACGCC
GGGCGCTCGC TGTTCGGCGG CGGAGACGCC AGCGCCAGCC CCGTCGGCAT CGGCCTCGCC
ATCGCCTCGC TGATCGTCAT GCCACTACTG GTCCGCGCCA AGCGGCGTAC CGGCCGGGAA
CTCGGCTCGG CTACCGTCAT GGCCGACTCC ACCCAGACCG CGCTCTGCAC GTATCTGTCC
GCGGTGCTCC TCGTGGGCCT GCTTCTCAAC GCCGGGCTCG GCTGGTCCTG GGCAGACCCC
ATCGCCGCGC TCGCCATCGC GGCCGTCGCG GTGCGGGAAG GGATCGCGGC GTGGCGGGGT
GATCAGTGCG ACGACTGCGC GCCACCCACC CGCGCCGCCT CCACCGCTGA CCCGGCACCG
AGTTGCACCG ACGGGTGCCA ACCCGACGCG GCCACACCCC AGTCGTAG
 
Protein sequence
MTTSALTPQR RALLSRRSLW LAYATAGYNL LEGLVAIAAG SAASSTALIG FGLDSFVEVS 
SAAVVIWQFR SRMPEERERL ALRLIGVSFF ALAAWVTVDA GRSLFGGGDA SASPVGIGLA
IASLIVMPLL VRAKRRTGRE LGSATVMADS TQTALCTYLS AVLLVGLLLN AGLGWSWADP
IAALAIAAVA VREGIAAWRG DQCDDCAPPT RAASTADPAP SCTDGCQPDA ATPQS