Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1674 |
Symbol | |
ID | 5058133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1910629 |
End bp | 1911336 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640473946 |
Product | cation efflux protein |
Protein accession | YP_001158516 |
Protein GI | 145594219 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.968978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCT CCGCACTGAC CCCCCAGCGG CGTGCGCTCC TGTCCCGACG CAGCCTCTGG CTGGCCTACG CCACCGCCGG ATACAACCTC CTGGAGGGCT TGGTCGCGAT CGCCGCCGGC TCGGCAGCCT CCTCCACCGC GCTGATTGGC TTCGGCCTCG ACTCGTTCGT CGAGGTCTCC AGCGCGGCCG TGGTGATCTG GCAGTTCCGC TCCCGGATGC CAGAGGAGCG GGAACGGTTG GCGCTGCGAC TGATCGGTGT CTCCTTCTTC GCCCTGGCCG CCTGGGTCAC CGTGGACGCC GGGCGCTCGC TGTTCGGCGG CGGAGACGCC AGCGCCAGCC CCGTCGGCAT CGGCCTCGCC ATCGCCTCGC TGATCGTCAT GCCACTACTG GTCCGCGCCA AGCGGCGTAC CGGCCGGGAA CTCGGCTCGG CTACCGTCAT GGCCGACTCC ACCCAGACCG CGCTCTGCAC GTATCTGTCC GCGGTGCTCC TCGTGGGCCT GCTTCTCAAC GCCGGGCTCG GCTGGTCCTG GGCAGACCCC ATCGCCGCGC TCGCCATCGC GGCCGTCGCG GTGCGGGAAG GGATCGCGGC GTGGCGGGGT GATCAGTGCG ACGACTGCGC GCCACCCACC CGCGCCGCCT CCACCGCTGA CCCGGCACCG AGTTGCACCG ACGGGTGCCA ACCCGACGCG GCCACACCCC AGTCGTAG
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Protein sequence | MTTSALTPQR RALLSRRSLW LAYATAGYNL LEGLVAIAAG SAASSTALIG FGLDSFVEVS SAAVVIWQFR SRMPEERERL ALRLIGVSFF ALAAWVTVDA GRSLFGGGDA SASPVGIGLA IASLIVMPLL VRAKRRTGRE LGSATVMADS TQTALCTYLS AVLLVGLLLN AGLGWSWADP IAALAIAAVA VREGIAAWRG DQCDDCAPPT RAASTADPAP SCTDGCQPDA ATPQS
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