| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1665 |
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| Symbol | |
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| ID | 5058124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1899361 |
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| End bp | 1900953 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473937 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001158507 |
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| Protein GI | 145594210 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.772741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATG TCACCCTCCG GGCCCTGTGC CTCCTGGAGG AGGCACAGGC CGGCGGTGCG
GCCCAGGTGC TGGCGGCCGC CGAGTTCGCG CTGCGGACAC CGACCGGAGA CATCTGCGAC
GGCCCGGCCG CGATGCACTT CGCGCGCGTT GTGGCGTTGA CCCGACTGGG TGATCTGCGA
GGTGCCGTCG GCGCAGCCGA CCTGATGCTG TCCGCCGCGG ACCGAGAGCA CAGCGTCGGA
TGGCGTTCAT GCGCGCTGTC GCTGCGCGCC ATCAGGCGGC TGCGCCTCGG CGACCTGGAC
ATCCGCGAGC ACGACATCGT AGCGGTGCTC CGGGATCTGG TCACCGCGGA GACTGCCCTG
CTCGCCGGCG AACCCGACCC CGTGATCGCG GGAAACGCCC ACACCGGGAT CGCTATCGGG
TACGCGCAAC TGCGCCTGTA CGAGTTGGCC GAGCCGCAGT TCCAGGCGGC GTACGAGACC
ACCTGTCAGG CGTCGTACCC GGACAACGGC AACCGGGCGA TGTGGCTGTG CAACCTCGCC
GAAAGTAGCC TGACGTGGGC CCTGGAGCTG TACCAGGTCG GCCAGGTGGC GGAGGCGGAG
CAGCACCTCA CGGTGGCCGA GGAGCACGCG GTACGGGCGG CGGCGGAGGC CTCCGGGCCG
AAGGCGGAGG TGTGGCGGCA CCTCGGGCTG CTCTTCGCGG CGTCCGCGCG TGCCGAAGGC
CGGGATCCGA CCGGCGCGGC CGATGACATC CCTCGGTACA TTGCCCAACT CCAGGCGTAC
GGCGTGCCAG AGCAGCAGGC GGAGGTGCTG TTGTGCCGAC CCTTCCACGC GGTCGCACTC
AACCGCTCCG GTCGCCTCGA CGAAGCCCTG CACGTCATCG AGCAGGCCGT CGTCGACCTG
TCGCCCGACG TCGCCTGGCT GGTGTCGGCG GCGTTGCACC GGACACACGC GGTGTTGCTG
GCCAAGAATG GATCACGCGA CGCCGGGCCG GGACTCACCT ATGGTGACAC GCTCGCGGAG
CTGCTGTGGC GCCAACGGCA CCGCTGGCTG CACGCGGCGG TGACGATGCA GTCGTACGAC
GTCCTGCGGT GGCAGCACGA GCAGGCCGAG CGGGCGGCAC GGACCGACCC GTTGACCGGG
GTGGCGAACC GGCGGGGGCT CGACAATTTC CTGCGGAAGC TGGCGGACCC GGACACCGCC
GACGACGACC GGGTCGCGGT GCTCGCCCTG GACATTGACT GTTTTAAGCG GATCAACGAC
TCGCAGGGAC ACGCCGCCGG CGACGAGGTG CTGCGCGCGG TAGCACAGGC GCTGACGACC
AGCGTCCGCA AGGGCGACTT CGTGGCCCGG CTGGGCGGTG ACGAGTTCGT CGCCATCCTC
CCCGGTGCCG ACTGCGTGGC CGCTGAACAG GTTGCCCTTC GGGCTGTTGA CGCCGTGAGC
GGACTGACGC CGTGGCGGAC GGGGGTCAGC GTCGGAGTCG CCAGCGGCGC CGCCCACTCG
CTCGGGATGT CGCTGGCTGA TGCCGACCGT GCGATGTACG CCGCGAAGCG GGCTGGCGGT
AACCAGGTGA GCCGCGGTCA CGTCGCGACC TGA
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| Protein sequence | MDDVTLRALC LLEEAQAGGA AQVLAAAEFA LRTPTGDICD GPAAMHFARV VALTRLGDLR
GAVGAADLML SAADREHSVG WRSCALSLRA IRRLRLGDLD IREHDIVAVL RDLVTAETAL
LAGEPDPVIA GNAHTGIAIG YAQLRLYELA EPQFQAAYET TCQASYPDNG NRAMWLCNLA
ESSLTWALEL YQVGQVAEAE QHLTVAEEHA VRAAAEASGP KAEVWRHLGL LFAASARAEG
RDPTGAADDI PRYIAQLQAY GVPEQQAEVL LCRPFHAVAL NRSGRLDEAL HVIEQAVVDL
SPDVAWLVSA ALHRTHAVLL AKNGSRDAGP GLTYGDTLAE LLWRQRHRWL HAAVTMQSYD
VLRWQHEQAE RAARTDPLTG VANRRGLDNF LRKLADPDTA DDDRVAVLAL DIDCFKRIND
SQGHAAGDEV LRAVAQALTT SVRKGDFVAR LGGDEFVAIL PGADCVAAEQ VALRAVDAVS
GLTPWRTGVS VGVASGAAHS LGMSLADADR AMYAAKRAGG NQVSRGHVAT
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