Gene Strop_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1645 
Symbol 
ID5058104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1874329 
End bp1874793 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content74% 
IMG OID640473918 
Productregulatory protein, MerR 
Protein accessionYP_001158488 
Protein GI145594191 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0841182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.942746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCC CGGTGCCCGG TGGTCCCGCG CCCGCCAGTG CGCCCGGGGC CACCGGTCGC 
CCGTCGGGCG TCGGGCCGCT GATGCGAATC GGCGAGGCGG CCGAGCGGGT CGGGCTGAGC
ATTCGCACCA TCCGGCACTA CGAGGACGCC GGGCTGATCG TCCCGTCGGC GCGCAGCGAG
GGCGGCTTCC GCCTCTACAC CGACGCCGAC GTGGAGCGTC TCGCGGTGGT AAAGCGGATG
AAGCCGCTCG GGTTCAGCCT CGACGAGATG CGGGCCCTGC TCGCTGTCCT GGACGCCCTG
GCTACCGCCG GCACCGCCGA CCGGCCGGCC CTGCTCGACC GACTCGGCCT GTTCCACACC
GTCGCCGCCA CCCGGGTGGA GGCGCTACGT GAGCAGCTCC GCACCGCGGA GGGCTTCGCC
GACACCCTGC GCCACCAACT CGACCAACAC CGGGTTCACC ACTGA
 
Protein sequence
MPGPVPGGPA PASAPGATGR PSGVGPLMRI GEAAERVGLS IRTIRHYEDA GLIVPSARSE 
GGFRLYTDAD VERLAVVKRM KPLGFSLDEM RALLAVLDAL ATAGTADRPA LLDRLGLFHT
VAATRVEALR EQLRTAEGFA DTLRHQLDQH RVHH