Gene Strop_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1617 
Symbol 
ID5058076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1837778 
End bp1838305 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID640473890 
Producthypothetical protein 
Protein accessionYP_001158460 
Protein GI145594163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACTGA CGGCAACCGA CTACCGTCGA CCCGTGCTCG ATCCCACAAC TGTCTTCGAC 
CGCTCCGGCC CGCTGGAGGA CCCGCTCACC GACGAAGTCC TACAGGTAGT GGAGGCACAG
CTTGGACACA AGCTACCCAC CGCATACGTC GACCTGGCTC GTCGACACAA CGGCGGCTCG
TTCGCCCGTG ATGCCCACCC GGCACCCAGT CCAACCTCTT GGGCTGAAGA GCACATCGGC
GTGGACATCC TGGCGGCAAT CGGTCACACC GCTCCGTTCA GTCTCTGCGG TGAGCTCGGC
AGCGCGTTCT GGGTAGCGGA ATGGGGCTAC CCCGACATCG GCATCTACAT CGCCGACTGT
CCGTCGGCGG GCCACGACAT GATCGCCCTT GACTACCGCT CGCCCGGAAG CCCCACCGTC
GTACACGTCG ATCAGGAAAG GGACTACCAG ATCACAGCCC TCGCCCCCGA CTTCGAGACC
TTCGTGACGG GCCTGGTCTA CGAATCCACG TACGAATTCG ACAAATGA
 
Protein sequence
MELTATDYRR PVLDPTTVFD RSGPLEDPLT DEVLQVVEAQ LGHKLPTAYV DLARRHNGGS 
FARDAHPAPS PTSWAEEHIG VDILAAIGHT APFSLCGELG SAFWVAEWGY PDIGIYIADC
PSAGHDMIAL DYRSPGSPTV VHVDQERDYQ ITALAPDFET FVTGLVYEST YEFDK