Gene Strop_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1595 
Symbol 
ID5058053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1814633 
End bp1816078 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content75% 
IMG OID640473868 
ProductATPase domain-containing protein 
Protein accessionYP_001158439 
Protein GI145594142 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.147276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CCGCCGCGCC TGCCGATCGT TCCCACCCCG ACACGGGCCC CCCACCCCGC 
ACGGCCGGCC GGGCGCGCGG ACGGCGCTGG ACCCCCCTTG GCCTCCGCGG ACAGCTGATG
GTGATCGGCG TGCTCGGCGT GTCGGCGGGG CTCGTCGTCG GCGGTCTGGT GCTGCTGGCC
GTGCTCAACT GGACTCTGCA CCGCAACGTC GACACGGAGG CGCTGCGCAC CGCCGACGCC
ATCGCGCTGC TGGCCGCCGA AGACGCCCTG CCCGACCCCC TGCCCGTCGC CGGCAGCCAG
GTGCGGGTTC AGGTGATCGA CGCGCGGGGA CGGGTCCGTG CCGCCTCCAT CGACGCCGAC
CGGCTGGTGC CGATGGTCCG GCCGGAACAG GTCGACCGCA CCGCCCGCGC CGGCATCACC
GTGCCGGGGC AACGAATGGG GCTGACCGGG CCGATGCGGG TGGTGGCCGT CCCGGCCGGC
GTCGACGGCG ACCCGCTCAC CGTGCTGGTC GCCCGCTCGC TGCTGGACGT GCGGCAGAGT
ATCCACGTCG TCCAAACTGT CCTGCTGGTG AGCTTCCCGC CGCTGGTGGG TCTCCTCGCC
CTCGTGGCCT GGCGGGCCGT TGGCGCGACG CTACGCCCGG TGGAGGCGCT GCGCCGGGGC
GCCGAGGAGA TCACCGGTCG GGACGGGCGC GGCCAGCTAC CCGTACCAGC GTCACAGGAC
GAGATCCACC GGCTCGCGGT GACCCTTAAC GACATGCTGG ATCGGCTGCG CGCCAGCCGG
GACCGGGAGC GGGCGTTCGT CGCCGACGCC GCGCACGAAC TGCGTAGCCC GCTGACCAAT
CTGCGGACCG AGCTCGAGGT CGCGCAGCGG CTGGGGGACC GGACCGACTG GGGAGCCATC
TCGGTGGACC TGCTGGCCGA CACCGAACGG CTCGGCCGGC TTGTCGACGA CCTGCTGCTG
CTCGCCCGCC TTGACGAGGC CCCACCCGCC CGCGGCACCG GGCCGGTCGC CCTGGGCGCC
CTGCTGACCG AGGTGGCCGC TCGCCACCCG GCGACGAGTG TCCAGGTGGC ACCCTCGGCG
GCGCCGCTCT GGGCGGTCGG CGACCTGGAC GAACTGCGCC GGGTGCTGGT CAACCTGGTC
GACAACGCGG TACGGCACGC CCGCAGTCGG GTGCTGCTCA GCGTCGAGCC GGACGGGCCC
GCGTACCACC GGGTGACGGT GACCGATGAC GGGCCCGGCA TCCCGGCGGT GGACCGGGAA
CGGGTTTTCG GCCGGTTCAC CCGGCTGGAC GTCGCGCGCG ACCGGGACGC CGGTGGCGCC
GGCCTGGGGC TCGCCATCGT GCGCGAGTTG GTCCGGCGCG CCGGCGGTTC TGTCGACCTC
GACGACGCCG ACCCGCCACC GGGCCTGCGC GTGCGGGTAA CCCTGCCCGC GCTGCCCACC
GAGTAG
 
Protein sequence
MTEPAAPADR SHPDTGPPPR TAGRARGRRW TPLGLRGQLM VIGVLGVSAG LVVGGLVLLA 
VLNWTLHRNV DTEALRTADA IALLAAEDAL PDPLPVAGSQ VRVQVIDARG RVRAASIDAD
RLVPMVRPEQ VDRTARAGIT VPGQRMGLTG PMRVVAVPAG VDGDPLTVLV ARSLLDVRQS
IHVVQTVLLV SFPPLVGLLA LVAWRAVGAT LRPVEALRRG AEEITGRDGR GQLPVPASQD
EIHRLAVTLN DMLDRLRASR DRERAFVADA AHELRSPLTN LRTELEVAQR LGDRTDWGAI
SVDLLADTER LGRLVDDLLL LARLDEAPPA RGTGPVALGA LLTEVAARHP ATSVQVAPSA
APLWAVGDLD ELRRVLVNLV DNAVRHARSR VLLSVEPDGP AYHRVTVTDD GPGIPAVDRE
RVFGRFTRLD VARDRDAGGA GLGLAIVREL VRRAGGSVDL DDADPPPGLR VRVTLPALPT
E