Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1581 |
Symbol | |
ID | 5058039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1797653 |
End bp | 1798519 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640473854 |
Product | UspA domain-containing protein |
Protein accession | YP_001158425 |
Protein GI | 145594128 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.582811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCA CGGAGATCCT GGTCGGCTAC GACGGCTCGC AGGACGCGGT CCGCGCCCAG GAGTGGGCGA TGGACGAGGC CGCCCGGAGC GGACGGTCGG TGCACCTCGC GTACGTCTTC GAGTGGCTCA CCATGGCCGG GTGGACCGGC CCCGGTGGGG GGCCCAGCAT CTGGCCCGAC GAGACGGCGC GACGGCAGGC GGAGGAGCTG GTCCGGCAGG CCGCGGCGGA CGCGACCAGC CCGGAGCTGA CCGTCACCGG TGAGTTGTAC GAGGGGCCGC CCGCGCTGGT GCTCCAGGAG CGCTCGGCGC GGGCCAGCCT GCTGGTGCTC GGTACGCGCG GGCTCGGCGG CTTCGCCGGC CTGCTGGTCG GCTCGACGGC GGGATCGGTG GCCGCGCACG CCCACTGCCC GGTGGTGGTG GTCCGGGGCG ACGCCGACCG CCGGGGGCGG GCCGGGCACG TCACGACCGG GGTGGACGGT TCGGAGGAGT CGCTGCTCGC CCTGGGCTTC GCCGTCGAGC AGGCCGCCGC CCGGAAGGTA CCGCTGCACG TGCTGCGCGT GTGGCGTCCG CCGCCGGGTC AACGTCCGCC GTCCGCCCCG GATGCCCGGG CGGCGAGCCA GGCGGACCGC GCCGAGCTGG AGGAGTCACT GTCCCCGTGG CGGCGGGCGT TCCCGGATGT CCCCATCACG GTGGAGGTGG CCGAGGGCAA CCCGGCCGAG CTGCTCGTGA CGGCCAGCCG CCACGCCCAG CTGGTCGTGG TCGGCAGCCG CGGCCGCGGC GGCCTGGCCG GAATGCTGCT CGGCTCGGTC AGCCAACAGC TTCTGCACCA CGCGCACTCG CCGGTCGCCG TGGTCCGCGA ACGCTGA
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Protein sequence | MNGTEILVGY DGSQDAVRAQ EWAMDEAARS GRSVHLAYVF EWLTMAGWTG PGGGPSIWPD ETARRQAEEL VRQAAADATS PELTVTGELY EGPPALVLQE RSARASLLVL GTRGLGGFAG LLVGSTAGSV AAHAHCPVVV VRGDADRRGR AGHVTTGVDG SEESLLALGF AVEQAAARKV PLHVLRVWRP PPGQRPPSAP DARAASQADR AELEESLSPW RRAFPDVPIT VEVAEGNPAE LLVTASRHAQ LVVVGSRGRG GLAGMLLGSV SQQLLHHAHS PVAVVRER
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