| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1580 |
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| Symbol | |
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| ID | 5058038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1795730 |
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| End bp | 1797610 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640473853 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001158424 |
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| Protein GI | 145594127 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.648046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCGG AGCCGGAGTG CGTGCCCGAG CAACCGGCGC GATCCGGGCC GGGCGGCCGA
CTGCTCTGGG CGCCGCTGGG TGGGCTGACC GCGCTGGTGC TCGCCGGTGT GGCAGCACGG
CTCGCCGGCC GGTCGGGCCT CGGTGACCTG CTCTGGGCCG CCGCCACCGT GGCCGCGCTG
GTGCCGGCCG CCGGGTCGAT GCTGCGCGAG CTCTGGCACC GGCGGTACGG CGTTGACGTC
ATCGCCGTCC TCGCGCTGGC GGGCGCGCTC GTGGTGGGGG AGTACCTCGC CGGGGCGGTG
ATCGCGGTGA TGGTGGCCAC CGGTCGGACC CTGGAGGCGT ACGCCCAGGG TCGGGCGACC
CGCGACCTCC GGGCACTGCT CGCCCACGCC CCACGAACCG CGCGCCGACG TGCCCCGGAC
GGGACGATCG AGGTGGTCCC GGCAGACCAG GTTGTCGCCG GGGACGAGCT GCTGGTCGGC
CCCGGCGACG TGGTGCCGGT CGACGGGAAG CTTGCCGCGG CGGCCACGCT CGACGAGTCG
GTGGTGACGG GAGAGTCGCG GCTCGTCCAA CGCGCCCCGG GTGACCCGGT GGGGAGCGGT
GTGGTGAACG CCGGTGCCGC CTTTGGCCTG CGGGCGACCG CGGACGCGGC TTCCAGCACG
TACGCCGGGA TCGTGCGGCT GGCGCGGGAG GCCACCGCGC AGAAGGCACC GACGGTCCGG
CTGGCCGACC GGTACGCCGT CGCCTTTGTT CCGTTTACCC TGCTGCTCGC CGGGCTGGGC
TGGCTGGTCT CCGGCGACGT GGTCCGGGCG GTGGCGGTTC TGGTGGTGGC GACACCCTGC
CCACTTCTGC TGGCCACCCC GATCGCCATC GTCTCCGGCC TGTCCCGTAC CGCCCGGCAC
GGTGTCCTGG TCCGCGACGG TGGTTCCCTC GAACTGCTCG GCCGGGCCCG CACCCTGCTG
CTGGACAAGA CCGGAACCCT TACCGCCGGC CGACCCCGGG TGGCCGAGAC GGTGCCGGCG
CCGGGGACCA CGGCCGACGA GGTGCTGCGT CTCGCCGCCT CCGTGGAACA GCTGTCCCCA
CATGTGCTGG CCACCGCCCT GGTGGAGGGG GCGCGGGAGC GAGAGCTCGA CCTCGCTGAG
CCGGAGGGGG TCACCGAGGA ACCGGGCCGG GGCGTACGCG GGCGGGTGGA CGGCCGTGAC
CTGTGGGTGG GGCAGCTCGA CAGCACGCCG CCGCAGTGGG CGGCCTCGGC GCGGGACCGG
GCCGAGGAGG CAGGGCACTC GTTGGTGTGG GTCGGTGGTG CGGACGGGCC GCTCGGCGCG
ATCCTGCTGG CAGACCCGGT CCGGTCCGAC GCGTCGCGGA CCGTCGGCCG GCTGCGGGCG
GCGGGGCTGC GCCGGATCGT CATGGTCACC GGTGACCGTC CGGCCACCGC CAGCCGGGTG
GCCCGCGAGG TCGGGGTGGA CGACGTCCTC GCCCGCTGCG CGCCGGCCGA GAAAGCGGAC
CGGGTTCGCG CCGAGGTGGA CCGGGCGGTC ACCGTGATGG TTGGGGACGG GGTGAACGAC
GCCCCCGCCC TGGCCACCGC GGATGTCGGT GTGGCGATGG GCGCCACCGG GGCGACCGCG
TCGGCGGATG TCGCCGACGC GGTACTCACC GTTGACCGGC TGGAGCGCCT GGCCGACGCG
GTGGAGATCG CCCGGTACGC GCGCCGCATC GCCGTGCAGA GCGCCATGGT GGGCATGGGG
CTCGCCGTGC TGGCCATGTT CGTCGCCGCC CTCGGGCGGC TGCCGCCGGT GGCCGGTGCC
TTCCTCCAGG AGGGCATCGA CGTGCTGGTG ATCCTCAACG CGTTGCGTGC CCTGCTCGGC
CCGGCCACCC TGCGGCGGTG A
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| Protein sequence | MEAEPECVPE QPARSGPGGR LLWAPLGGLT ALVLAGVAAR LAGRSGLGDL LWAAATVAAL
VPAAGSMLRE LWHRRYGVDV IAVLALAGAL VVGEYLAGAV IAVMVATGRT LEAYAQGRAT
RDLRALLAHA PRTARRRAPD GTIEVVPADQ VVAGDELLVG PGDVVPVDGK LAAAATLDES
VVTGESRLVQ RAPGDPVGSG VVNAGAAFGL RATADAASST YAGIVRLARE ATAQKAPTVR
LADRYAVAFV PFTLLLAGLG WLVSGDVVRA VAVLVVATPC PLLLATPIAI VSGLSRTARH
GVLVRDGGSL ELLGRARTLL LDKTGTLTAG RPRVAETVPA PGTTADEVLR LAASVEQLSP
HVLATALVEG ARERELDLAE PEGVTEEPGR GVRGRVDGRD LWVGQLDSTP PQWAASARDR
AEEAGHSLVW VGGADGPLGA ILLADPVRSD ASRTVGRLRA AGLRRIVMVT GDRPATASRV
AREVGVDDVL ARCAPAEKAD RVRAEVDRAV TVMVGDGVND APALATADVG VAMGATGATA
SADVADAVLT VDRLERLADA VEIARYARRI AVQSAMVGMG LAVLAMFVAA LGRLPPVAGA
FLQEGIDVLV ILNALRALLG PATLRR
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