Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1574 |
Symbol | |
ID | 5058027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1787721 |
End bp | 1788323 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473842 |
Product | regulatory protein, TetR |
Protein accession | YP_001158418 |
Protein GI | 145594121 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.979673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAGAC GTGCGGCCGA GGTCCGCCTG GATGCCCTGC TGCGCACCGC CTGTGACGTG ATCGTGGAAC GCGGATTGGC GAACACCCGC ACCGCGGACG TGGCACAGGC GGCCGGGGTG AGTCAGGCAC TGGTCTTCTA CCACTTCGCC ACCAAGGACC GGCTACTCGC CGAGGCGTTC GCGTACGCCG TCGAGCAGGA TCTCACCCGG CTGGACGCGG TGATGCGCTC CAGCGCCCCG CCGCTGACCA AGCTCCGCCG GCTGGTGCGG CTCTACACAC CCGCCGGCCG CCCCACCTCG TGGGCCATGT GGATCGACGG CTGGGCCGAG TCGCTGCGTA CGCCGGAGTT GGAGAAGACC TCCCGACGGC TGGACCTGCG CTGGCGGCAG GACCTGGCGG CGGTGATCGC CGACGGGGTA GCCAACCACA CCTTCGAGTG CGCCGACCCG GCCGGCGCCG CGTGGCGGAT CAGCGCCGTG ATGGACGGTC TCGCCGTCCA GCTCGCGGTG CACAGCCGGG TGATCTCCCG ACGCCAGTTC ACCGAGTGGG TACGCCTGGT GACCGCCCGG GAGCTGGGAC TCGACCCGGC GCAGCTGGAC TGA
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Protein sequence | MTRRAAEVRL DALLRTACDV IVERGLANTR TADVAQAAGV SQALVFYHFA TKDRLLAEAF AYAVEQDLTR LDAVMRSSAP PLTKLRRLVR LYTPAGRPTS WAMWIDGWAE SLRTPELEKT SRRLDLRWRQ DLAAVIADGV ANHTFECADP AGAAWRISAV MDGLAVQLAV HSRVISRRQF TEWVRLVTAR ELGLDPAQLD
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