Gene Strop_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1574 
Symbol 
ID5058027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1787721 
End bp1788323 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content71% 
IMG OID640473842 
Productregulatory protein, TetR 
Protein accessionYP_001158418 
Protein GI145594121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.979673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGAC GTGCGGCCGA GGTCCGCCTG GATGCCCTGC TGCGCACCGC CTGTGACGTG 
ATCGTGGAAC GCGGATTGGC GAACACCCGC ACCGCGGACG TGGCACAGGC GGCCGGGGTG
AGTCAGGCAC TGGTCTTCTA CCACTTCGCC ACCAAGGACC GGCTACTCGC CGAGGCGTTC
GCGTACGCCG TCGAGCAGGA TCTCACCCGG CTGGACGCGG TGATGCGCTC CAGCGCCCCG
CCGCTGACCA AGCTCCGCCG GCTGGTGCGG CTCTACACAC CCGCCGGCCG CCCCACCTCG
TGGGCCATGT GGATCGACGG CTGGGCCGAG TCGCTGCGTA CGCCGGAGTT GGAGAAGACC
TCCCGACGGC TGGACCTGCG CTGGCGGCAG GACCTGGCGG CGGTGATCGC CGACGGGGTA
GCCAACCACA CCTTCGAGTG CGCCGACCCG GCCGGCGCCG CGTGGCGGAT CAGCGCCGTG
ATGGACGGTC TCGCCGTCCA GCTCGCGGTG CACAGCCGGG TGATCTCCCG ACGCCAGTTC
ACCGAGTGGG TACGCCTGGT GACCGCCCGG GAGCTGGGAC TCGACCCGGC GCAGCTGGAC
TGA
 
Protein sequence
MTRRAAEVRL DALLRTACDV IVERGLANTR TADVAQAAGV SQALVFYHFA TKDRLLAEAF 
AYAVEQDLTR LDAVMRSSAP PLTKLRRLVR LYTPAGRPTS WAMWIDGWAE SLRTPELEKT
SRRLDLRWRQ DLAAVIADGV ANHTFECADP AGAAWRISAV MDGLAVQLAV HSRVISRRQF
TEWVRLVTAR ELGLDPAQLD